Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
Sycp1Q62209 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sycp1Q62209 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sycp1Q62209 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Sycp1Q62209 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sycp1Q62209 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sycp1Q62209 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sycp1Q62209 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sycp1Q62209 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sycp1Q62209 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Sycp1Q62209 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sycp1Q62209 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.65■□□□□ 0.74
Sycp1Q62209 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.65■□□□□ 0.74
Sycp1Q62209 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sycp1Q62209 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sycp1Q62209 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sycp1Q62209 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.65■□□□□ 0.74
Sycp1Q62209 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sycp1Q62209 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sycp1Q62209 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sycp1Q62209 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sycp1Q62209 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sycp1Q62209 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Sycp1Q62209 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sycp1Q62209 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sycp1Q62209 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Sycp1Q62209 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sycp1Q62209 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sycp1Q62209 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Sycp1Q62209 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sycp1Q62209 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sycp1Q62209 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sycp1Q62209 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sycp1Q62209 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sycp1Q62209 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.64■□□□□ 0.73
Sycp1Q62209 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sycp1Q62209 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sycp1Q62209 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sycp1Q62209 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sycp1Q62209 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Sycp1Q62209 Gm20760-201ENSMUST00000179197 648 ntBASIC19.63■□□□□ 0.73
Sycp1Q62209 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.63■□□□□ 0.73
Sycp1Q62209 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.63■□□□□ 0.73
Sycp1Q62209 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sycp1Q62209 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Sycp1Q62209 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sycp1Q62209 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Sycp1Q62209 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sycp1Q62209 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sycp1Q62209 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sycp1Q62209 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sycp1Q62209 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sycp1Q62209 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sycp1Q62209 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
Sycp1Q62209 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sycp1Q62209 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sycp1Q62209 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sycp1Q62209 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.62■□□□□ 0.73
Sycp1Q62209 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sycp1Q62209 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sycp1Q62209 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sycp1Q62209 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sycp1Q62209 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sycp1Q62209 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sycp1Q62209 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sycp1Q62209 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sycp1Q62209 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sycp1Q62209 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sycp1Q62209 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.61■□□□□ 0.73
Sycp1Q62209 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sycp1Q62209 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Sycp1Q62209 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sycp1Q62209 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sycp1Q62209 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Sycp1Q62209 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Sycp1Q62209 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sycp1Q62209 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.6■□□□□ 0.73
Sycp1Q62209 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.6■□□□□ 0.73
Sycp1Q62209 Gm13158-201ENSMUST00000122007 736 ntBASIC19.6■□□□□ 0.73
Sycp1Q62209 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.6■□□□□ 0.73
Sycp1Q62209 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.6■□□□□ 0.73
Sycp1Q62209 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sycp1Q62209 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Sycp1Q62209 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sycp1Q62209 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sycp1Q62209 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.6■□□□□ 0.73
Sycp1Q62209 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sycp1Q62209 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.6■□□□□ 0.73
Sycp1Q62209 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sycp1Q62209 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sycp1Q62209 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sycp1Q62209 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sycp1Q62209 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sycp1Q62209 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sycp1Q62209 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sycp1Q62209 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sycp1Q62209 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sycp1Q62209 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sycp1Q62209 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Sycp1Q62209 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms