Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vsx2Q61412 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx2Q61412 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx2Q61412 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Vsx2Q61412 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx2Q61412 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx2Q61412 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx2Q61412 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Vsx2Q61412 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.07■□□□□ 0.32
Vsx2Q61412 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx2Q61412 Gm10812-201ENSMUST00000099864 546 ntBASIC17.07■□□□□ 0.32
Vsx2Q61412 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx2Q61412 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Vsx2Q61412 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx2Q61412 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Vsx2Q61412 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx2Q61412 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx2Q61412 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx2Q61412 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Vsx2Q61412 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx2Q61412 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx2Q61412 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vsx2Q61412 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx2Q61412 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx2Q61412 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx2Q61412 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx2Q61412 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Vsx2Q61412 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx2Q61412 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.06■□□□□ 0.32
Vsx2Q61412 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx2Q61412 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx2Q61412 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.06■□□□□ 0.32
Vsx2Q61412 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.06■□□□□ 0.32
Vsx2Q61412 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Vsx2Q61412 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx2Q61412 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx2Q61412 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx2Q61412 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx2Q61412 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx2Q61412 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx2Q61412 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx2Q61412 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.06■□□□□ 0.32
Vsx2Q61412 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.05■□□□□ 0.32
Vsx2Q61412 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx2Q61412 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.05■□□□□ 0.32
Vsx2Q61412 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx2Q61412 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx2Q61412 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx2Q61412 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.05■□□□□ 0.32
Vsx2Q61412 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.05■□□□□ 0.32
Vsx2Q61412 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx2Q61412 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx2Q61412 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx2Q61412 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx2Q61412 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx2Q61412 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx2Q61412 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx2Q61412 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx2Q61412 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
Vsx2Q61412 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx2Q61412 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx2Q61412 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.04■□□□□ 0.32
Vsx2Q61412 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx2Q61412 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Vsx2Q61412 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx2Q61412 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx2Q61412 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx2Q61412 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx2Q61412 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.04■□□□□ 0.32
Vsx2Q61412 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.04■□□□□ 0.32
Vsx2Q61412 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.04■□□□□ 0.32
Vsx2Q61412 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx2Q61412 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx2Q61412 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx2Q61412 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Vsx2Q61412 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx2Q61412 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx2Q61412 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
Vsx2Q61412 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx2Q61412 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.04■□□□□ 0.32
Vsx2Q61412 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.04■□□□□ 0.32
Vsx2Q61412 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx2Q61412 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx2Q61412 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.03■□□□□ 0.32
Vsx2Q61412 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx2Q61412 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx2Q61412 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx2Q61412 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.03■□□□□ 0.32
Vsx2Q61412 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Vsx2Q61412 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.03■□□□□ 0.32
Vsx2Q61412 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx2Q61412 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.03■□□□□ 0.32
Vsx2Q61412 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx2Q61412 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx2Q61412 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.03■□□□□ 0.32
Vsx2Q61412 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Vsx2Q61412 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx2Q61412 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx2Q61412 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx2Q61412 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms