Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Traf4Q61382 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Traf4Q61382 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Traf4Q61382 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Traf4Q61382 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Traf4Q61382 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.52■□□□□ 0.08
Traf4Q61382 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Traf4Q61382 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Traf4Q61382 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Traf4Q61382 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Traf4Q61382 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Traf4Q61382 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Traf4Q61382 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.52■□□□□ 0.08
Traf4Q61382 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Traf4Q61382 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Traf4Q61382 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Traf4Q61382 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Traf4Q61382 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Traf4Q61382 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Traf4Q61382 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Traf4Q61382 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Traf4Q61382 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Traf4Q61382 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Traf4Q61382 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Traf4Q61382 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Traf4Q61382 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Traf4Q61382 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Traf4Q61382 Gm15378-201ENSMUST00000121894 207 ntBASIC15.51■□□□□ 0.07
Traf4Q61382 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.51■□□□□ 0.07
Traf4Q61382 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.51■□□□□ 0.07
Traf4Q61382 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Traf4Q61382 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Traf4Q61382 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Traf4Q61382 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.51■□□□□ 0.07
Traf4Q61382 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Traf4Q61382 Flg-201ENSMUST00000050758 1488 ntBASIC15.51■□□□□ 0.07
Traf4Q61382 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Traf4Q61382 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Traf4Q61382 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.5■□□□□ 0.07
Traf4Q61382 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Traf4Q61382 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Traf4Q61382 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Traf4Q61382 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Traf4Q61382 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.5■□□□□ 0.07
Traf4Q61382 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Traf4Q61382 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Traf4Q61382 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Traf4Q61382 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.5■□□□□ 0.07
Traf4Q61382 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Traf4Q61382 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.5■□□□□ 0.07
Traf4Q61382 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Traf4Q61382 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Traf4Q61382 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Traf4Q61382 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Traf4Q61382 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Traf4Q61382 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Traf4Q61382 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Traf4Q61382 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Traf4Q61382 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Traf4Q61382 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.5■□□□□ 0.07
Traf4Q61382 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Traf4Q61382 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Traf4Q61382 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Traf4Q61382 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Traf4Q61382 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Traf4Q61382 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Traf4Q61382 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.49■□□□□ 0.07
Traf4Q61382 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Traf4Q61382 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Traf4Q61382 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Traf4Q61382 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Traf4Q61382 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Traf4Q61382 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Traf4Q61382 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Traf4Q61382 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.49■□□□□ 0.07
Traf4Q61382 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.49■□□□□ 0.07
Traf4Q61382 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.49■□□□□ 0.07
Traf4Q61382 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Traf4Q61382 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.49■□□□□ 0.07
Traf4Q61382 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.49■□□□□ 0.07
Traf4Q61382 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Traf4Q61382 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Traf4Q61382 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Traf4Q61382 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Traf4Q61382 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Traf4Q61382 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.48■□□□□ 0.07
Traf4Q61382 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Traf4Q61382 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Traf4Q61382 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Traf4Q61382 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Traf4Q61382 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Traf4Q61382 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Traf4Q61382 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Traf4Q61382 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.48■□□□□ 0.07
Traf4Q61382 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.48■□□□□ 0.07
Traf4Q61382 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.48■□□□□ 0.07
Traf4Q61382 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Traf4Q61382 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Traf4Q61382 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Traf4Q61382 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms