Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Gm9847-201ENSMUST00000052528 599 ntBASIC15.04■□□□□ -0
Clns1aQ61189 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Clns1aQ61189 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clns1aQ61189 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clns1aQ61189 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clns1aQ61189 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clns1aQ61189 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.03■□□□□ -0
Clns1aQ61189 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clns1aQ61189 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clns1aQ61189 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clns1aQ61189 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.03■□□□□ -0
Clns1aQ61189 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Clns1aQ61189 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Clns1aQ61189 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.03■□□□□ -0
Clns1aQ61189 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.03■□□□□ -0
Clns1aQ61189 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Clns1aQ61189 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clns1aQ61189 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Clns1aQ61189 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.03■□□□□ -0
Clns1aQ61189 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.02■□□□□ -0
Clns1aQ61189 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clns1aQ61189 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clns1aQ61189 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clns1aQ61189 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clns1aQ61189 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Clns1aQ61189 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clns1aQ61189 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clns1aQ61189 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clns1aQ61189 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.02■□□□□ -0
Clns1aQ61189 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Clns1aQ61189 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.02■□□□□ -0
Clns1aQ61189 Mir7075-201ENSMUST00000184187 82 ntBASIC15.02■□□□□ -0
Clns1aQ61189 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Clns1aQ61189 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.02■□□□□ -0
Clns1aQ61189 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clns1aQ61189 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Clns1aQ61189 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clns1aQ61189 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clns1aQ61189 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clns1aQ61189 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clns1aQ61189 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.02□□□□□ -0.01
Clns1aQ61189 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Clns1aQ61189 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clns1aQ61189 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clns1aQ61189 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.02□□□□□ -0.01
Clns1aQ61189 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.02□□□□□ -0.01
Clns1aQ61189 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.02□□□□□ -0.01
Clns1aQ61189 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Clns1aQ61189 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.02□□□□□ -0.01
Clns1aQ61189 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clns1aQ61189 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clns1aQ61189 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.01□□□□□ -0.01
Clns1aQ61189 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clns1aQ61189 Idnk-204ENSMUST00000226010 1898 ntBASIC15.01□□□□□ -0.01
Clns1aQ61189 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clns1aQ61189 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clns1aQ61189 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clns1aQ61189 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clns1aQ61189 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clns1aQ61189 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.01□□□□□ -0.01
Clns1aQ61189 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clns1aQ61189 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.01□□□□□ -0.01
Clns1aQ61189 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.01□□□□□ -0.01
Clns1aQ61189 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.01□□□□□ -0.01
Clns1aQ61189 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.01□□□□□ -0.01
Clns1aQ61189 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clns1aQ61189 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clns1aQ61189 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clns1aQ61189 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clns1aQ61189 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clns1aQ61189 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clns1aQ61189 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clns1aQ61189 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clns1aQ61189 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clns1aQ61189 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Clns1aQ61189 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clns1aQ61189 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clns1aQ61189 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clns1aQ61189 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.01□□□□□ -0.01
Clns1aQ61189 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clns1aQ61189 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Clns1aQ61189 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clns1aQ61189 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Clns1aQ61189 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clns1aQ61189 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Clns1aQ61189 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Clns1aQ61189 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Clns1aQ61189 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clns1aQ61189 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Clns1aQ61189 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clns1aQ61189 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clns1aQ61189 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clns1aQ61189 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15□□□□□ -0.01
Clns1aQ61189 Gm45774-201ENSMUST00000211992 2665 ntBASIC15□□□□□ -0.01
Clns1aQ61189 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clns1aQ61189 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clns1aQ61189 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clns1aQ61189 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clns1aQ61189 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clns1aQ61189 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms