Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cln3Q61124 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Cln3Q61124 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.27■□□□□ 0.68
Cln3Q61124 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Cln3Q61124 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cln3Q61124 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cln3Q61124 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.27■□□□□ 0.68
Cln3Q61124 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Cln3Q61124 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cln3Q61124 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cln3Q61124 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cln3Q61124 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cln3Q61124 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cln3Q61124 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.26■□□□□ 0.67
Cln3Q61124 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.26■□□□□ 0.67
Cln3Q61124 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.26■□□□□ 0.67
Cln3Q61124 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cln3Q61124 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cln3Q61124 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.26■□□□□ 0.67
Cln3Q61124 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cln3Q61124 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cln3Q61124 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cln3Q61124 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Cln3Q61124 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cln3Q61124 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cln3Q61124 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cln3Q61124 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cln3Q61124 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cln3Q61124 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cln3Q61124 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cln3Q61124 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cln3Q61124 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cln3Q61124 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cln3Q61124 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.25■□□□□ 0.67
Cln3Q61124 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.25■□□□□ 0.67
Cln3Q61124 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.25■□□□□ 0.67
Cln3Q61124 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cln3Q61124 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cln3Q61124 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cln3Q61124 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cln3Q61124 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cln3Q61124 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cln3Q61124 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cln3Q61124 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cln3Q61124 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cln3Q61124 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cln3Q61124 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cln3Q61124 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cln3Q61124 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.24■□□□□ 0.67
Cln3Q61124 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cln3Q61124 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cln3Q61124 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Cln3Q61124 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.24■□□□□ 0.67
Cln3Q61124 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cln3Q61124 Actl10-202ENSMUST00000226583 1501 ntBASIC19.24■□□□□ 0.67
Cln3Q61124 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cln3Q61124 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cln3Q61124 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cln3Q61124 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cln3Q61124 Gm11950-201ENSMUST00000121615 838 ntBASIC19.23■□□□□ 0.67
Cln3Q61124 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Cln3Q61124 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cln3Q61124 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cln3Q61124 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cln3Q61124 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.23■□□□□ 0.67
Cln3Q61124 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cln3Q61124 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cln3Q61124 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cln3Q61124 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cln3Q61124 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cln3Q61124 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cln3Q61124 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cln3Q61124 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cln3Q61124 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cln3Q61124 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.22■□□□□ 0.67
Cln3Q61124 Gm18958-201ENSMUST00000174258 762 ntBASIC19.22■□□□□ 0.67
Cln3Q61124 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cln3Q61124 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cln3Q61124 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cln3Q61124 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.22■□□□□ 0.67
Cln3Q61124 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cln3Q61124 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cln3Q61124 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cln3Q61124 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cln3Q61124 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cln3Q61124 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cln3Q61124 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cln3Q61124 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cln3Q61124 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cln3Q61124 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cln3Q61124 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.21■□□□□ 0.67
Cln3Q61124 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cln3Q61124 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cln3Q61124 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Cln3Q61124 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cln3Q61124 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cln3Q61124 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cln3Q61124 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cln3Q61124 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cln3Q61124 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms