Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ripk1Q60855 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Ripk1Q60855 Gm12441-201ENSMUST00000121806 588 ntBASIC16.53■□□□□ 0.24
Ripk1Q60855 Gm8969-201ENSMUST00000199694 526 ntBASIC16.53■□□□□ 0.24
Ripk1Q60855 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.53■□□□□ 0.24
Ripk1Q60855 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ripk1Q60855 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ripk1Q60855 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ripk1Q60855 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ripk1Q60855 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ripk1Q60855 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ripk1Q60855 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ripk1Q60855 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ripk1Q60855 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ripk1Q60855 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.53■□□□□ 0.24
Ripk1Q60855 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ripk1Q60855 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ripk1Q60855 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ripk1Q60855 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ripk1Q60855 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ripk1Q60855 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ripk1Q60855 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.52■□□□□ 0.24
Ripk1Q60855 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ripk1Q60855 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ripk1Q60855 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.52■□□□□ 0.24
Ripk1Q60855 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ripk1Q60855 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.52■□□□□ 0.24
Ripk1Q60855 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ripk1Q60855 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ripk1Q60855 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ripk1Q60855 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ripk1Q60855 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.52■□□□□ 0.24
Ripk1Q60855 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.52■□□□□ 0.24
Ripk1Q60855 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ripk1Q60855 Mir2861-201ENSMUST00000175539 82 ntBASIC16.52■□□□□ 0.24
Ripk1Q60855 Gm29257-201ENSMUST00000186115 639 ntBASIC16.52■□□□□ 0.24
Ripk1Q60855 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ripk1Q60855 Mtag2-201ENSMUST00000058665 714 ntBASIC16.52■□□□□ 0.24
Ripk1Q60855 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ripk1Q60855 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ripk1Q60855 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ripk1Q60855 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ripk1Q60855 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ripk1Q60855 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.51■□□□□ 0.23
Ripk1Q60855 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ripk1Q60855 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ripk1Q60855 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ripk1Q60855 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ripk1Q60855 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.51■□□□□ 0.23
Ripk1Q60855 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ripk1Q60855 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ripk1Q60855 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ripk1Q60855 Gm10418-201ENSMUST00000100943 576 ntBASIC16.51■□□□□ 0.23
Ripk1Q60855 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ripk1Q60855 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.51■□□□□ 0.23
Ripk1Q60855 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ripk1Q60855 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.51■□□□□ 0.23
Ripk1Q60855 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ripk1Q60855 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ripk1Q60855 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ripk1Q60855 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ripk1Q60855 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ripk1Q60855 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ripk1Q60855 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ripk1Q60855 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ripk1Q60855 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ripk1Q60855 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.5■□□□□ 0.23
Ripk1Q60855 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ripk1Q60855 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ripk1Q60855 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ripk1Q60855 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ripk1Q60855 Gm11249-201ENSMUST00000117071 859 ntBASIC16.5■□□□□ 0.23
Ripk1Q60855 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ripk1Q60855 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.5■□□□□ 0.23
Ripk1Q60855 Gm10138-203ENSMUST00000206952 366 ntBASIC16.5■□□□□ 0.23
Ripk1Q60855 Gm29791-202ENSMUST00000207888 369 ntBASIC16.5■□□□□ 0.23
Ripk1Q60855 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ripk1Q60855 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ripk1Q60855 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ripk1Q60855 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ripk1Q60855 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ripk1Q60855 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ripk1Q60855 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.5■□□□□ 0.23
Ripk1Q60855 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ripk1Q60855 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ripk1Q60855 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ripk1Q60855 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ripk1Q60855 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ripk1Q60855 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
Ripk1Q60855 Gm20049-201ENSMUST00000219950 730 ntBASIC16.49■□□□□ 0.23
Ripk1Q60855 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.49■□□□□ 0.23
Ripk1Q60855 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ripk1Q60855 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ripk1Q60855 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.49■□□□□ 0.23
Ripk1Q60855 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ripk1Q60855 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ripk1Q60855 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ripk1Q60855 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ripk1Q60855 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.48■□□□□ 0.23
Ripk1Q60855 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms