Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm10493-201ENSMUST00000097270 612 ntBASIC16.73■□□□□ 0.27
Nr1h4Q60641 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Nr1h4Q60641 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1h4Q60641 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1h4Q60641 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1h4Q60641 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Nr1h4Q60641 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1h4Q60641 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nr1h4Q60641 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.72■□□□□ 0.27
Nr1h4Q60641 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h4Q60641 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h4Q60641 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h4Q60641 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h4Q60641 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h4Q60641 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h4Q60641 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Nr1h4Q60641 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.71■□□□□ 0.27
Nr1h4Q60641 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h4Q60641 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h4Q60641 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h4Q60641 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h4Q60641 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h4Q60641 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nr1h4Q60641 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Nr1h4Q60641 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nr1h4Q60641 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h4Q60641 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1h4Q60641 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1h4Q60641 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1h4Q60641 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nr1h4Q60641 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.69■□□□□ 0.26
Nr1h4Q60641 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.69■□□□□ 0.26
Nr1h4Q60641 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.69■□□□□ 0.26
Nr1h4Q60641 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.69■□□□□ 0.26
Nr1h4Q60641 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1h4Q60641 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1h4Q60641 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1h4Q60641 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nr1h4Q60641 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1h4Q60641 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1h4Q60641 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1h4Q60641 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1h4Q60641 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1h4Q60641 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1h4Q60641 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Nr1h4Q60641 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1h4Q60641 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1h4Q60641 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1h4Q60641 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.68■□□□□ 0.26
Nr1h4Q60641 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Nr1h4Q60641 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms