Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Znf48Q3US17 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Znf48Q3US17 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.45□□□□□ -0.1
Znf48Q3US17 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.45□□□□□ -0.1
Znf48Q3US17 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Znf48Q3US17 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Znf48Q3US17 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Znf48Q3US17 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Znf48Q3US17 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Znf48Q3US17 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Znf48Q3US17 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Znf48Q3US17 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Znf48Q3US17 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.45□□□□□ -0.1
Znf48Q3US17 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Znf48Q3US17 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Znf48Q3US17 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Znf48Q3US17 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Znf48Q3US17 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Znf48Q3US17 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Znf48Q3US17 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Znf48Q3US17 BC021767-201ENSMUST00000126387 1716 ntBASIC14.44□□□□□ -0.1
Znf48Q3US17 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Znf48Q3US17 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.44□□□□□ -0.1
Znf48Q3US17 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.44□□□□□ -0.1
Znf48Q3US17 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Znf48Q3US17 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Znf48Q3US17 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Znf48Q3US17 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Znf48Q3US17 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Znf48Q3US17 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Znf48Q3US17 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Znf48Q3US17 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.43□□□□□ -0.1
Znf48Q3US17 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Znf48Q3US17 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Znf48Q3US17 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Znf48Q3US17 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Znf48Q3US17 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Znf48Q3US17 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Znf48Q3US17 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.43□□□□□ -0.1
Znf48Q3US17 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Znf48Q3US17 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Znf48Q3US17 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Znf48Q3US17 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Znf48Q3US17 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.43□□□□□ -0.1
Znf48Q3US17 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Znf48Q3US17 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.43□□□□□ -0.1
Znf48Q3US17 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Znf48Q3US17 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Znf48Q3US17 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Znf48Q3US17 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Znf48Q3US17 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Znf48Q3US17 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Znf48Q3US17 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Znf48Q3US17 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Znf48Q3US17 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Znf48Q3US17 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Znf48Q3US17 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Znf48Q3US17 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Znf48Q3US17 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Znf48Q3US17 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Znf48Q3US17 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Znf48Q3US17 Gm13158-201ENSMUST00000122007 736 ntBASIC14.42□□□□□ -0.1
Znf48Q3US17 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Znf48Q3US17 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Znf48Q3US17 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Znf48Q3US17 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Znf48Q3US17 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Znf48Q3US17 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Znf48Q3US17 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Znf48Q3US17 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Znf48Q3US17 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.42□□□□□ -0.1
Znf48Q3US17 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Znf48Q3US17 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Znf48Q3US17 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Znf48Q3US17 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Znf48Q3US17 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms