Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Shisa3Q3UPR0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Shisa3Q3UPR0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa3Q3UPR0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Gm13216-201ENSMUST00000117145 591 ntBASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa3Q3UPR0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 Gm6420-201ENSMUST00000193885 723 ntBASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa3Q3UPR0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms