Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Khdc4Q3TCX3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Khdc4Q3TCX3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Khdc4Q3TCX3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Khdc4Q3TCX3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Khdc4Q3TCX3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Khdc4Q3TCX3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Khdc4Q3TCX3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Khdc4Q3TCX3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc4Q3TCX3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc4Q3TCX3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Khdc4Q3TCX3 Gm42545-201ENSMUST00000202755 922 ntBASIC16.69■□□□□ 0.26
Khdc4Q3TCX3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.69■□□□□ 0.26
Khdc4Q3TCX3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc4Q3TCX3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Khdc4Q3TCX3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc4Q3TCX3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc4Q3TCX3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc4Q3TCX3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc4Q3TCX3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc4Q3TCX3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc4Q3TCX3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc4Q3TCX3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Khdc4Q3TCX3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Khdc4Q3TCX3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Khdc4Q3TCX3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Khdc4Q3TCX3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.68■□□□□ 0.26
Khdc4Q3TCX3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.68■□□□□ 0.26
Khdc4Q3TCX3 Gm15375-201ENSMUST00000119510 849 ntBASIC16.68■□□□□ 0.26
Khdc4Q3TCX3 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.68■□□□□ 0.26
Khdc4Q3TCX3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Khdc4Q3TCX3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Khdc4Q3TCX3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Khdc4Q3TCX3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Khdc4Q3TCX3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Gm18025-201ENSMUST00000221733 862 ntBASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc4Q3TCX3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc4Q3TCX3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc4Q3TCX3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc4Q3TCX3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc4Q3TCX3 Gm43799-201ENSMUST00000201845 579 ntBASIC16.66■□□□□ 0.26
Khdc4Q3TCX3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.66■□□□□ 0.26
Khdc4Q3TCX3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.66■□□□□ 0.26
Khdc4Q3TCX3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.66■□□□□ 0.26
Khdc4Q3TCX3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc4Q3TCX3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.66■□□□□ 0.26
Khdc4Q3TCX3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc4Q3TCX3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc4Q3TCX3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Khdc4Q3TCX3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc4Q3TCX3 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.66■□□□□ 0.26
Khdc4Q3TCX3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc4Q3TCX3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Khdc4Q3TCX3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Khdc4Q3TCX3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Khdc4Q3TCX3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc4Q3TCX3 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.65■□□□□ 0.26
Khdc4Q3TCX3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc4Q3TCX3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc4Q3TCX3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc4Q3TCX3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc4Q3TCX3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Khdc4Q3TCX3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc4Q3TCX3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc4Q3TCX3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.65■□□□□ 0.26
Khdc4Q3TCX3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc4Q3TCX3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc4Q3TCX3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc4Q3TCX3 Gm38285-201ENSMUST00000192928 922 ntBASIC16.65■□□□□ 0.26
Khdc4Q3TCX3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Khdc4Q3TCX3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc4Q3TCX3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc4Q3TCX3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc4Q3TCX3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Khdc4Q3TCX3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Khdc4Q3TCX3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Khdc4Q3TCX3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc4Q3TCX3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc4Q3TCX3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.64■□□□□ 0.25
Khdc4Q3TCX3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms