Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Mir5131-201ENSMUST00000175426 93 ntBASIC18.73■□□□□ 0.59
Col19a1Q0VF58 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.73■□□□□ 0.59
Col19a1Q0VF58 Gm2213-201ENSMUST00000197485 688 ntBASIC18.73■□□□□ 0.59
Col19a1Q0VF58 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col19a1Q0VF58 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Col19a1Q0VF58 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col19a1Q0VF58 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col19a1Q0VF58 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Col19a1Q0VF58 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.73■□□□□ 0.59
Col19a1Q0VF58 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Col19a1Q0VF58 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col19a1Q0VF58 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Col19a1Q0VF58 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col19a1Q0VF58 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Col19a1Q0VF58 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col19a1Q0VF58 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col19a1Q0VF58 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col19a1Q0VF58 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col19a1Q0VF58 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.72■□□□□ 0.59
Col19a1Q0VF58 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col19a1Q0VF58 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col19a1Q0VF58 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col19a1Q0VF58 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col19a1Q0VF58 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.71■□□□□ 0.59
Col19a1Q0VF58 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col19a1Q0VF58 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.71■□□□□ 0.59
Col19a1Q0VF58 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col19a1Q0VF58 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Col19a1Q0VF58 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Col19a1Q0VF58 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col19a1Q0VF58 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col19a1Q0VF58 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col19a1Q0VF58 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col19a1Q0VF58 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Col19a1Q0VF58 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
Col19a1Q0VF58 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col19a1Q0VF58 Gm27702-201ENSMUST00000184512 56 ntBASIC18.7■□□□□ 0.58
Col19a1Q0VF58 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.7■□□□□ 0.58
Col19a1Q0VF58 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Col19a1Q0VF58 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.7■□□□□ 0.58
Col19a1Q0VF58 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Col19a1Q0VF58 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col19a1Q0VF58 Rps4l-201ENSMUST00000071745 943 ntBASIC18.7■□□□□ 0.58
Col19a1Q0VF58 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col19a1Q0VF58 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col19a1Q0VF58 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.7■□□□□ 0.58
Col19a1Q0VF58 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col19a1Q0VF58 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Col19a1Q0VF58 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col19a1Q0VF58 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col19a1Q0VF58 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col19a1Q0VF58 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col19a1Q0VF58 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col19a1Q0VF58 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col19a1Q0VF58 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col19a1Q0VF58 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.69■□□□□ 0.58
Col19a1Q0VF58 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col19a1Q0VF58 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.69■□□□□ 0.58
Col19a1Q0VF58 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col19a1Q0VF58 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col19a1Q0VF58 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.69■□□□□ 0.58
Col19a1Q0VF58 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col19a1Q0VF58 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col19a1Q0VF58 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col19a1Q0VF58 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col19a1Q0VF58 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col19a1Q0VF58 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col19a1Q0VF58 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.68■□□□□ 0.58
Col19a1Q0VF58 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col19a1Q0VF58 Gm12644-201ENSMUST00000119935 606 ntBASIC18.68■□□□□ 0.58
Col19a1Q0VF58 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.68■□□□□ 0.58
Col19a1Q0VF58 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col19a1Q0VF58 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.68■□□□□ 0.58
Col19a1Q0VF58 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col19a1Q0VF58 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col19a1Q0VF58 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col19a1Q0VF58 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col19a1Q0VF58 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col19a1Q0VF58 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col19a1Q0VF58 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col19a1Q0VF58 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Col19a1Q0VF58 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col19a1Q0VF58 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.67■□□□□ 0.58
Col19a1Q0VF58 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col19a1Q0VF58 Gm43575-201ENSMUST00000196420 516 ntBASIC18.67■□□□□ 0.58
Col19a1Q0VF58 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col19a1Q0VF58 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Col19a1Q0VF58 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col19a1Q0VF58 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Col19a1Q0VF58 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
Col19a1Q0VF58 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Col19a1Q0VF58 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col19a1Q0VF58 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col19a1Q0VF58 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col19a1Q0VF58 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col19a1Q0VF58 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.67■□□□□ 0.58
Col19a1Q0VF58 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col19a1Q0VF58 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col19a1Q0VF58 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col19a1Q0VF58 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms