Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Atf1P81269 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atf1P81269 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atf1P81269 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atf1P81269 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Atf1P81269 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atf1P81269 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.19■□□□□ 0.02
Atf1P81269 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atf1P81269 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atf1P81269 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Atf1P81269 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atf1P81269 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf1P81269 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf1P81269 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.18■□□□□ 0.02
Atf1P81269 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf1P81269 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf1P81269 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.18■□□□□ 0.02
Atf1P81269 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.18■□□□□ 0.02
Atf1P81269 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.18■□□□□ 0.02
Atf1P81269 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atf1P81269 Mir2861-201ENSMUST00000175539 82 ntBASIC15.18■□□□□ 0.02
Atf1P81269 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.18■□□□□ 0.02
Atf1P81269 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.18■□□□□ 0.02
Atf1P81269 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atf1P81269 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atf1P81269 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.18■□□□□ 0.02
Atf1P81269 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf1P81269 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atf1P81269 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf1P81269 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atf1P81269 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Atf1P81269 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Atf1P81269 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf1P81269 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf1P81269 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf1P81269 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Atf1P81269 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf1P81269 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf1P81269 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.17■□□□□ 0.02
Atf1P81269 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf1P81269 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf1P81269 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.17■□□□□ 0.02
Atf1P81269 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.17■□□□□ 0.02
Atf1P81269 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.17■□□□□ 0.02
Atf1P81269 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Atf1P81269 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf1P81269 Mtag2-201ENSMUST00000058665 714 ntBASIC15.17■□□□□ 0.02
Atf1P81269 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atf1P81269 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Atf1P81269 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf1P81269 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.17■□□□□ 0.02
Atf1P81269 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf1P81269 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf1P81269 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf1P81269 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf1P81269 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atf1P81269 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Atf1P81269 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf1P81269 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.16■□□□□ 0.02
Atf1P81269 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Atf1P81269 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf1P81269 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf1P81269 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf1P81269 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.16■□□□□ 0.02
Atf1P81269 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Atf1P81269 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf1P81269 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atf1P81269 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Atf1P81269 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atf1P81269 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf1P81269 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf1P81269 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf1P81269 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf1P81269 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.16■□□□□ 0.02
Atf1P81269 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atf1P81269 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf1P81269 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atf1P81269 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Atf1P81269 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf1P81269 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atf1P81269 Mir8112-201ENSMUST00000184382 131 ntBASIC15.15■□□□□ 0.02
Atf1P81269 Gm2559-201ENSMUST00000201323 363 ntBASIC15.15■□□□□ 0.02
Atf1P81269 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf1P81269 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf1P81269 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf1P81269 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf1P81269 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.15■□□□□ 0.02
Atf1P81269 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.15■□□□□ 0.02
Atf1P81269 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atf1P81269 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atf1P81269 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf1P81269 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf1P81269 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf1P81269 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atf1P81269 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf1P81269 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf1P81269 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atf1P81269 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.14■□□□□ 0.01
Atf1P81269 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atf1P81269 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms