Protein–RNA interactions for Protein: P70338

Gfi1, Zinc finger protein Gfi-1, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1P70338 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gfi1P70338 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gfi1P70338 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Gfi1P70338 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gfi1P70338 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Gfi1P70338 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gfi1P70338 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gfi1P70338 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.65■□□□□ 0.26
Gfi1P70338 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gfi1P70338 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gfi1P70338 Gm11643-201ENSMUST00000119578 864 ntBASIC16.65■□□□□ 0.26
Gfi1P70338 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.65■□□□□ 0.26
Gfi1P70338 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Gfi1P70338 Gm6576-201ENSMUST00000169678 883 ntBASIC16.65■□□□□ 0.26
Gfi1P70338 Gm42545-201ENSMUST00000202755 922 ntBASIC16.65■□□□□ 0.26
Gfi1P70338 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.65■□□□□ 0.26
Gfi1P70338 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Gfi1P70338 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gfi1P70338 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gfi1P70338 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gfi1P70338 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Gfi1P70338 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gfi1P70338 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gfi1P70338 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gfi1P70338 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gfi1P70338 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gfi1P70338 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gfi1P70338 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.64■□□□□ 0.25
Gfi1P70338 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.64■□□□□ 0.25
Gfi1P70338 Trmt13-210ENSMUST00000198454 880 ntBASIC16.64■□□□□ 0.25
Gfi1P70338 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gfi1P70338 Gm18025-201ENSMUST00000221733 862 ntBASIC16.64■□□□□ 0.25
Gfi1P70338 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gfi1P70338 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gfi1P70338 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gfi1P70338 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gfi1P70338 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Gfi1P70338 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gfi1P70338 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Gfi1P70338 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gfi1P70338 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Gfi1P70338 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gfi1P70338 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gfi1P70338 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Gfi1P70338 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Gfi1P70338 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Gfi1P70338 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gfi1P70338 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gfi1P70338 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gfi1P70338 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gfi1P70338 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gfi1P70338 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gfi1P70338 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gfi1P70338 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.63■□□□□ 0.25
Gfi1P70338 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gfi1P70338 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gfi1P70338 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Gfi1P70338 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Gfi1P70338 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gfi1P70338 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Gfi1P70338 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gfi1P70338 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gfi1P70338 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.63■□□□□ 0.25
Gfi1P70338 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gfi1P70338 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Gfi1P70338 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gfi1P70338 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gfi1P70338 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gfi1P70338 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Gfi1P70338 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gfi1P70338 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gfi1P70338 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gfi1P70338 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.62■□□□□ 0.25
Gfi1P70338 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gfi1P70338 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.62■□□□□ 0.25
Gfi1P70338 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.62■□□□□ 0.25
Gfi1P70338 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gfi1P70338 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gfi1P70338 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Gfi1P70338 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gfi1P70338 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gfi1P70338 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gfi1P70338 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Gfi1P70338 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gfi1P70338 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gfi1P70338 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gfi1P70338 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gfi1P70338 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gfi1P70338 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Gfi1P70338 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Gfi1P70338 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gfi1P70338 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gfi1P70338 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.61■□□□□ 0.25
Gfi1P70338 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Gfi1P70338 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gfi1P70338 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gfi1P70338 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gfi1P70338 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.61■□□□□ 0.25
Gfi1P70338 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.61■□□□□ 0.25
Gfi1P70338 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms