Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.62□□□□□ -0.23
Pfn1P62962 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfn1P62962 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfn1P62962 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfn1P62962 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfn1P62962 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfn1P62962 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Pfn1P62962 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfn1P62962 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pfn1P62962 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfn1P62962 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.62□□□□□ -0.23
Pfn1P62962 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfn1P62962 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pfn1P62962 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfn1P62962 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfn1P62962 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfn1P62962 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Pfn1P62962 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfn1P62962 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfn1P62962 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfn1P62962 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Pfn1P62962 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfn1P62962 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfn1P62962 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Pfn1P62962 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pfn1P62962 Mir7075-201ENSMUST00000184187 82 ntBASIC13.61□□□□□ -0.23
Pfn1P62962 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.61□□□□□ -0.23
Pfn1P62962 Wdr70-203ENSMUST00000227371 1130 ntBASIC13.61□□□□□ -0.23
Pfn1P62962 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pfn1P62962 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfn1P62962 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pfn1P62962 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfn1P62962 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfn1P62962 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pfn1P62962 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.6□□□□□ -0.23
Pfn1P62962 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Pfn1P62962 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pfn1P62962 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pfn1P62962 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.6□□□□□ -0.23
Pfn1P62962 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pfn1P62962 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.6□□□□□ -0.23
Pfn1P62962 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pfn1P62962 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pfn1P62962 Gm13241-201ENSMUST00000094493 780 ntBASIC13.6□□□□□ -0.23
Pfn1P62962 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfn1P62962 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pfn1P62962 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pfn1P62962 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pfn1P62962 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pfn1P62962 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.59□□□□□ -0.23
Pfn1P62962 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfn1P62962 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pfn1P62962 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pfn1P62962 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfn1P62962 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfn1P62962 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfn1P62962 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfn1P62962 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfn1P62962 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfn1P62962 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC13.59□□□□□ -0.23
Pfn1P62962 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfn1P62962 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfn1P62962 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pfn1P62962 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pfn1P62962 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pfn1P62962 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pfn1P62962 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfn1P62962 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfn1P62962 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfn1P62962 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pfn1P62962 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pfn1P62962 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pfn1P62962 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pfn1P62962 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfn1P62962 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.59□□□□□ -0.23
Pfn1P62962 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.23
Pfn1P62962 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pfn1P62962 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.58□□□□□ -0.24
Pfn1P62962 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pfn1P62962 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms