Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1bP61025 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1bP61025 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1bP61025 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1bP61025 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1bP61025 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1bP61025 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1bP61025 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Cks1bP61025 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1bP61025 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1bP61025 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.51□□□□□ -0.41
Cks1bP61025 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1bP61025 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cks1bP61025 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1bP61025 Gm15853-202ENSMUST00000195518 2041 ntBASIC12.51□□□□□ -0.41
Cks1bP61025 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1bP61025 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1bP61025 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1bP61025 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1bP61025 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1bP61025 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1bP61025 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1bP61025 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.51□□□□□ -0.41
Cks1bP61025 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1bP61025 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Cks1bP61025 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1bP61025 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1bP61025 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1bP61025 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1bP61025 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cks1bP61025 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cks1bP61025 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Cks1bP61025 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC12.5□□□□□ -0.41
Cks1bP61025 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.5□□□□□ -0.41
Cks1bP61025 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.5□□□□□ -0.41
Cks1bP61025 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cks1bP61025 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cks1bP61025 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.5□□□□□ -0.41
Cks1bP61025 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cks1bP61025 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cks1bP61025 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC12.49□□□□□ -0.41
Cks1bP61025 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cks1bP61025 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Cks1bP61025 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC12.49□□□□□ -0.41
Cks1bP61025 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.49□□□□□ -0.41
Cks1bP61025 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Cks1bP61025 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cks1bP61025 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.48□□□□□ -0.41
Cks1bP61025 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1bP61025 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cks1bP61025 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Cks1bP61025 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1bP61025 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1bP61025 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1bP61025 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.48□□□□□ -0.41
Cks1bP61025 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1bP61025 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1bP61025 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1bP61025 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1bP61025 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms