Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp25P57080 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp25P57080 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp25P57080 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp25P57080 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp25P57080 Gm15039-201ENSMUST00000118914 875 ntBASIC19.88■□□□□ 0.77
Usp25P57080 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.88■□□□□ 0.77
Usp25P57080 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.88■□□□□ 0.77
Usp25P57080 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp25P57080 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.88■□□□□ 0.77
Usp25P57080 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp25P57080 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp25P57080 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Usp25P57080 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.88■□□□□ 0.77
Usp25P57080 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
Usp25P57080 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.88■□□□□ 0.77
Usp25P57080 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usp25P57080 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp25P57080 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Usp25P57080 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.87■□□□□ 0.77
Usp25P57080 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp25P57080 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp25P57080 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp25P57080 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Usp25P57080 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp25P57080 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp25P57080 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usp25P57080 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Usp25P57080 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Usp25P57080 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp25P57080 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Usp25P57080 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp25P57080 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp25P57080 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Usp25P57080 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp25P57080 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.86■□□□□ 0.77
Usp25P57080 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp25P57080 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp25P57080 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp25P57080 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.86■□□□□ 0.77
Usp25P57080 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp25P57080 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp25P57080 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.86■□□□□ 0.77
Usp25P57080 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp25P57080 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp25P57080 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp25P57080 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp25P57080 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp25P57080 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp25P57080 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Usp25P57080 Gm5874-201ENSMUST00000096101 508 ntBASIC19.85■□□□□ 0.77
Usp25P57080 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp25P57080 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp25P57080 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp25P57080 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Usp25P57080 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp25P57080 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp25P57080 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp25P57080 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp25P57080 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp25P57080 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.84■□□□□ 0.77
Usp25P57080 Gm13234-201ENSMUST00000120010 747 ntBASIC19.84■□□□□ 0.77
Usp25P57080 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp25P57080 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp25P57080 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp25P57080 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.83■□□□□ 0.77
Usp25P57080 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp25P57080 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Usp25P57080 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Usp25P57080 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp25P57080 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp25P57080 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp25P57080 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp25P57080 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.83■□□□□ 0.77
Usp25P57080 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
Usp25P57080 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp25P57080 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Usp25P57080 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Usp25P57080 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp25P57080 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp25P57080 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp25P57080 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp25P57080 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp25P57080 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp25P57080 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp25P57080 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp25P57080 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp25P57080 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp25P57080 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp25P57080 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp25P57080 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Usp25P57080 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp25P57080 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp25P57080 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Usp25P57080 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp25P57080 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp25P57080 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.82■□□□□ 0.76
Usp25P57080 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.82■□□□□ 0.76
Usp25P57080 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Usp25P57080 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms