Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.64■□□□□ 0.58
NrlP54846 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NrlP54846 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NrlP54846 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NrlP54846 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NrlP54846 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NrlP54846 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NrlP54846 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NrlP54846 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NrlP54846 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.64■□□□□ 0.57
NrlP54846 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NrlP54846 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NrlP54846 Gm22697-201ENSMUST00000175194 63 ntBASIC18.64■□□□□ 0.57
NrlP54846 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NrlP54846 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NrlP54846 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NrlP54846 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
NrlP54846 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NrlP54846 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NrlP54846 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NrlP54846 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NrlP54846 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NrlP54846 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NrlP54846 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NrlP54846 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NrlP54846 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NrlP54846 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NrlP54846 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NrlP54846 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.63■□□□□ 0.57
NrlP54846 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NrlP54846 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NrlP54846 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NrlP54846 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NrlP54846 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.63■□□□□ 0.57
NrlP54846 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NrlP54846 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NrlP54846 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NrlP54846 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
NrlP54846 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NrlP54846 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NrlP54846 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.62■□□□□ 0.57
NrlP54846 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NrlP54846 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NrlP54846 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NrlP54846 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NrlP54846 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NrlP54846 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.62■□□□□ 0.57
NrlP54846 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NrlP54846 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NrlP54846 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NrlP54846 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NrlP54846 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
NrlP54846 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NrlP54846 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
NrlP54846 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NrlP54846 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NrlP54846 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NrlP54846 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NrlP54846 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
NrlP54846 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NrlP54846 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.62■□□□□ 0.57
NrlP54846 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NrlP54846 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NrlP54846 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NrlP54846 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NrlP54846 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NrlP54846 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NrlP54846 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NrlP54846 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NrlP54846 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NrlP54846 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NrlP54846 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.61■□□□□ 0.57
NrlP54846 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NrlP54846 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NrlP54846 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NrlP54846 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
NrlP54846 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.61■□□□□ 0.57
NrlP54846 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NrlP54846 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NrlP54846 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NrlP54846 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NrlP54846 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NrlP54846 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NrlP54846 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NrlP54846 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NrlP54846 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
NrlP54846 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NrlP54846 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
NrlP54846 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NrlP54846 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NrlP54846 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NrlP54846 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NrlP54846 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.6■□□□□ 0.57
NrlP54846 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NrlP54846 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.6■□□□□ 0.57
NrlP54846 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NrlP54846 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.6■□□□□ 0.57
NrlP54846 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NrlP54846 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NrlP54846 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms