Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Atxn1P54254 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Atxn1P54254 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atxn1P54254 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Atxn1P54254 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Atxn1P54254 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Atxn1P54254 Gm38285-201ENSMUST00000192928 922 ntBASIC17.38■□□□□ 0.37
Atxn1P54254 Gm18669-201ENSMUST00000216049 778 ntBASIC17.38■□□□□ 0.37
Atxn1P54254 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atxn1P54254 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atxn1P54254 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Atxn1P54254 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atxn1P54254 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Atxn1P54254 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atxn1P54254 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atxn1P54254 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Atxn1P54254 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atxn1P54254 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.38■□□□□ 0.37
Atxn1P54254 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atxn1P54254 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.37■□□□□ 0.37
Atxn1P54254 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.37■□□□□ 0.37
Atxn1P54254 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atxn1P54254 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atxn1P54254 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atxn1P54254 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atxn1P54254 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.37■□□□□ 0.37
Atxn1P54254 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atxn1P54254 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.37■□□□□ 0.37
Atxn1P54254 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Atxn1P54254 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atxn1P54254 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atxn1P54254 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atxn1P54254 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Atxn1P54254 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atxn1P54254 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Atxn1P54254 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atxn1P54254 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Atxn1P54254 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atxn1P54254 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atxn1P54254 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atxn1P54254 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atxn1P54254 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Atxn1P54254 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Atxn1P54254 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.36■□□□□ 0.37
Atxn1P54254 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.36■□□□□ 0.37
Atxn1P54254 Mzt1-203ENSMUST00000227948 952 ntBASIC17.36■□□□□ 0.37
Atxn1P54254 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Atxn1P54254 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atxn1P54254 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atxn1P54254 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.36■□□□□ 0.37
Atxn1P54254 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Atxn1P54254 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atxn1P54254 Grk6-206ENSMUST00000224995 2971 ntBASIC17.35■□□□□ 0.37
Atxn1P54254 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atxn1P54254 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atxn1P54254 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atxn1P54254 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.35■□□□□ 0.37
Atxn1P54254 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atxn1P54254 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atxn1P54254 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.35■□□□□ 0.37
Atxn1P54254 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atxn1P54254 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atxn1P54254 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atxn1P54254 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atxn1P54254 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.35■□□□□ 0.37
Atxn1P54254 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atxn1P54254 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atxn1P54254 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atxn1P54254 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atxn1P54254 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atxn1P54254 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atxn1P54254 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atxn1P54254 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atxn1P54254 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Atxn1P54254 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.34■□□□□ 0.37
Atxn1P54254 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atxn1P54254 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atxn1P54254 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atxn1P54254 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atxn1P54254 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Atxn1P54254 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Atxn1P54254 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atxn1P54254 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.34■□□□□ 0.37
Atxn1P54254 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.34■□□□□ 0.37
Atxn1P54254 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Atxn1P54254 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atxn1P54254 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Atxn1P54254 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Atxn1P54254 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Atxn1P54254 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atxn1P54254 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atxn1P54254 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atxn1P54254 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.33■□□□□ 0.36
Atxn1P54254 Gm6443-201ENSMUST00000203599 874 ntBASIC17.33■□□□□ 0.36
Atxn1P54254 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atxn1P54254 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atxn1P54254 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atxn1P54254 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atxn1P54254 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Atxn1P54254 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms