Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.72■□□□□ 0.27
CcnfP51944 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CcnfP51944 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CcnfP51944 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CcnfP51944 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.72■□□□□ 0.27
CcnfP51944 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.72■□□□□ 0.27
CcnfP51944 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CcnfP51944 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CcnfP51944 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CcnfP51944 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CcnfP51944 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CcnfP51944 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CcnfP51944 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CcnfP51944 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CcnfP51944 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CcnfP51944 Nespas-201ENSMUST00000143738 1083 ntBASIC16.71■□□□□ 0.27
CcnfP51944 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CcnfP51944 Gm6420-201ENSMUST00000193885 723 ntBASIC16.71■□□□□ 0.27
CcnfP51944 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CcnfP51944 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CcnfP51944 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CcnfP51944 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CcnfP51944 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CcnfP51944 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CcnfP51944 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CcnfP51944 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CcnfP51944 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CcnfP51944 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnfP51944 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnfP51944 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnfP51944 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnfP51944 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnfP51944 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnfP51944 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnfP51944 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnfP51944 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnfP51944 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnfP51944 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.7■□□□□ 0.26
CcnfP51944 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CcnfP51944 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnfP51944 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnfP51944 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnfP51944 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnfP51944 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnfP51944 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnfP51944 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnfP51944 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnfP51944 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CcnfP51944 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CcnfP51944 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CcnfP51944 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.69■□□□□ 0.26
CcnfP51944 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CcnfP51944 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CcnfP51944 Gm10418-201ENSMUST00000100943 576 ntBASIC16.69■□□□□ 0.26
CcnfP51944 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.69■□□□□ 0.26
CcnfP51944 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CcnfP51944 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CcnfP51944 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CcnfP51944 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CcnfP51944 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CcnfP51944 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CcnfP51944 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CcnfP51944 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CcnfP51944 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CcnfP51944 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CcnfP51944 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CcnfP51944 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CcnfP51944 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CcnfP51944 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CcnfP51944 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CcnfP51944 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CcnfP51944 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CcnfP51944 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CcnfP51944 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CcnfP51944 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CcnfP51944 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.67■□□□□ 0.26
CcnfP51944 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.67■□□□□ 0.26
CcnfP51944 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.67■□□□□ 0.26
CcnfP51944 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.67■□□□□ 0.26
CcnfP51944 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.67■□□□□ 0.26
CcnfP51944 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CcnfP51944 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CcnfP51944 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.67■□□□□ 0.26
CcnfP51944 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.67■□□□□ 0.26
CcnfP51944 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CcnfP51944 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CcnfP51944 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CcnfP51944 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CcnfP51944 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CcnfP51944 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CcnfP51944 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.67■□□□□ 0.26
CcnfP51944 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CcnfP51944 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CcnfP51944 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CcnfP51944 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CcnfP51944 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CcnfP51944 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.66■□□□□ 0.26
CcnfP51944 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CcnfP51944 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CcnfP51944 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms