Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx3P50481 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx3P50481 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.78■□□□□ 0.44
Lhx3P50481 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx3P50481 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Lhx3P50481 Gm30025-201ENSMUST00000218555 728 ntBASIC17.78■□□□□ 0.44
Lhx3P50481 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx3P50481 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx3P50481 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx3P50481 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx3P50481 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx3P50481 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.78■□□□□ 0.44
Lhx3P50481 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx3P50481 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx3P50481 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.78■□□□□ 0.44
Lhx3P50481 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx3P50481 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx3P50481 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.77■□□□□ 0.44
Lhx3P50481 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Lhx3P50481 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lhx3P50481 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lhx3P50481 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Lhx3P50481 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lhx3P50481 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.77■□□□□ 0.44
Lhx3P50481 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.77■□□□□ 0.44
Lhx3P50481 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lhx3P50481 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lhx3P50481 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lhx3P50481 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Lhx3P50481 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx3P50481 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx3P50481 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx3P50481 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.76■□□□□ 0.43
Lhx3P50481 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Lhx3P50481 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx3P50481 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.76■□□□□ 0.43
Lhx3P50481 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.76■□□□□ 0.43
Lhx3P50481 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.76■□□□□ 0.43
Lhx3P50481 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx3P50481 Gm8969-201ENSMUST00000199694 526 ntBASIC17.76■□□□□ 0.43
Lhx3P50481 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.76■□□□□ 0.43
Lhx3P50481 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx3P50481 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx3P50481 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx3P50481 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Lhx3P50481 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lhx3P50481 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.75■□□□□ 0.43
Lhx3P50481 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lhx3P50481 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.75■□□□□ 0.43
Lhx3P50481 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.75■□□□□ 0.43
Lhx3P50481 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.75■□□□□ 0.43
Lhx3P50481 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lhx3P50481 Gm7638-201ENSMUST00000121348 967 ntBASIC17.75■□□□□ 0.43
Lhx3P50481 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lhx3P50481 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.75■□□□□ 0.43
Lhx3P50481 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lhx3P50481 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Lhx3P50481 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Lhx3P50481 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.75■□□□□ 0.43
Lhx3P50481 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lhx3P50481 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lhx3P50481 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx3P50481 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx3P50481 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
Lhx3P50481 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx3P50481 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.74■□□□□ 0.43
Lhx3P50481 Gm11539-201ENSMUST00000119837 557 ntBASIC17.74■□□□□ 0.43
Lhx3P50481 Gm13436-201ENSMUST00000120418 567 ntBASIC17.74■□□□□ 0.43
Lhx3P50481 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx3P50481 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx3P50481 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx3P50481 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx3P50481 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Lhx3P50481 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx3P50481 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.74■□□□□ 0.43
Lhx3P50481 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx3P50481 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.74■□□□□ 0.43
Lhx3P50481 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx3P50481 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Lhx3P50481 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx3P50481 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx3P50481 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx3P50481 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx3P50481 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx3P50481 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Lhx3P50481 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx3P50481 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Lhx3P50481 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.73■□□□□ 0.43
Lhx3P50481 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx3P50481 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Lhx3P50481 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx3P50481 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.73■□□□□ 0.43
Lhx3P50481 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Lhx3P50481 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.73■□□□□ 0.43
Lhx3P50481 Gm43799-201ENSMUST00000201845 579 ntBASIC17.73■□□□□ 0.43
Lhx3P50481 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.73■□□□□ 0.43
Lhx3P50481 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx3P50481 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Lhx3P50481 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx3P50481 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms