Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.37■□□□□ 0.53
Rfx2P48379 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx2P48379 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx2P48379 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx2P48379 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rfx2P48379 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx2P48379 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.37■□□□□ 0.53
Rfx2P48379 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.37■□□□□ 0.53
Rfx2P48379 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx2P48379 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx2P48379 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx2P48379 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx2P48379 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx2P48379 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx2P48379 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx2P48379 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx2P48379 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.37■□□□□ 0.53
Rfx2P48379 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx2P48379 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx2P48379 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx2P48379 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx2P48379 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rfx2P48379 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rfx2P48379 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rfx2P48379 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rfx2P48379 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Rfx2P48379 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rfx2P48379 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rfx2P48379 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx2P48379 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rfx2P48379 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rfx2P48379 Gm21814-202ENSMUST00000203277 873 ntBASIC18.36■□□□□ 0.53
Rfx2P48379 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx2P48379 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx2P48379 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx2P48379 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx2P48379 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.35■□□□□ 0.53
Rfx2P48379 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx2P48379 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx2P48379 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx2P48379 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx2P48379 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx2P48379 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx2P48379 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Rfx2P48379 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.35■□□□□ 0.53
Rfx2P48379 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.35■□□□□ 0.53
Rfx2P48379 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx2P48379 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.35■□□□□ 0.53
Rfx2P48379 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx2P48379 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx2P48379 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx2P48379 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx2P48379 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx2P48379 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.35■□□□□ 0.53
Rfx2P48379 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rfx2P48379 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx2P48379 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx2P48379 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx2P48379 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx2P48379 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx2P48379 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx2P48379 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx2P48379 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx2P48379 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx2P48379 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx2P48379 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx2P48379 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx2P48379 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx2P48379 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx2P48379 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx2P48379 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx2P48379 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx2P48379 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx2P48379 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Rfx2P48379 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx2P48379 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.34■□□□□ 0.53
Rfx2P48379 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Rfx2P48379 Timm23-208ENSMUST00000226683 750 ntBASIC18.34■□□□□ 0.53
Rfx2P48379 Odf3b-204ENSMUST00000227834 930 ntBASIC18.34■□□□□ 0.53
Rfx2P48379 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx2P48379 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rfx2P48379 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx2P48379 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx2P48379 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx2P48379 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx2P48379 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx2P48379 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.53
Rfx2P48379 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.33■□□□□ 0.53
Rfx2P48379 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
Rfx2P48379 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Rfx2P48379 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.33■□□□□ 0.52
Rfx2P48379 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.33■□□□□ 0.52
Rfx2P48379 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx2P48379 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx2P48379 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rfx2P48379 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.33■□□□□ 0.52
Rfx2P48379 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.33■□□□□ 0.52
Rfx2P48379 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx2P48379 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx2P48379 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms