Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox18P43680 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox18P43680 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Sox18P43680 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Sox18P43680 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Sox18P43680 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Sox18P43680 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.77■□□□□ 0.28
Sox18P43680 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sox18P43680 AW822252-206ENSMUST00000208904 237 ntBASIC16.77■□□□□ 0.28
Sox18P43680 Gm7370-201ENSMUST00000219471 767 ntBASIC16.77■□□□□ 0.28
Sox18P43680 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.77■□□□□ 0.28
Sox18P43680 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox18P43680 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Sox18P43680 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox18P43680 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox18P43680 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox18P43680 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox18P43680 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Sox18P43680 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox18P43680 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sox18P43680 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox18P43680 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox18P43680 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Sox18P43680 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox18P43680 Gm11950-201ENSMUST00000121615 838 ntBASIC16.76■□□□□ 0.27
Sox18P43680 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.76■□□□□ 0.27
Sox18P43680 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.76■□□□□ 0.27
Sox18P43680 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox18P43680 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.76■□□□□ 0.27
Sox18P43680 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox18P43680 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sox18P43680 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.76■□□□□ 0.27
Sox18P43680 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox18P43680 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Sox18P43680 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox18P43680 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox18P43680 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sox18P43680 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.76■□□□□ 0.27
Sox18P43680 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.76■□□□□ 0.27
Sox18P43680 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.76■□□□□ 0.27
Sox18P43680 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox18P43680 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox18P43680 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox18P43680 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Sox18P43680 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox18P43680 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Sox18P43680 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sox18P43680 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.75■□□□□ 0.27
Sox18P43680 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox18P43680 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox18P43680 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.75■□□□□ 0.27
Sox18P43680 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox18P43680 Gm28659-201ENSMUST00000188013 759 ntBASIC16.75■□□□□ 0.27
Sox18P43680 Gm4974-201ENSMUST00000209974 875 ntBASIC16.75■□□□□ 0.27
Sox18P43680 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Sox18P43680 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.75■□□□□ 0.27
Sox18P43680 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Sox18P43680 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox18P43680 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox18P43680 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox18P43680 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox18P43680 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox18P43680 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox18P43680 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Sox18P43680 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox18P43680 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox18P43680 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sox18P43680 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox18P43680 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox18P43680 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.74■□□□□ 0.27
Sox18P43680 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox18P43680 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox18P43680 Gm7791-201ENSMUST00000219066 539 ntBASIC16.74■□□□□ 0.27
Sox18P43680 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox18P43680 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sox18P43680 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox18P43680 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox18P43680 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox18P43680 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Sox18P43680 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Sox18P43680 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.73■□□□□ 0.27
Sox18P43680 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox18P43680 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.73■□□□□ 0.27
Sox18P43680 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.73■□□□□ 0.27
Sox18P43680 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox18P43680 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox18P43680 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox18P43680 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox18P43680 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Sox18P43680 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox18P43680 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.73■□□□□ 0.27
Sox18P43680 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.73■□□□□ 0.27
Sox18P43680 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox18P43680 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox18P43680 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.73■□□□□ 0.27
Sox18P43680 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox18P43680 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Sox18P43680 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Sox18P43680 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox18P43680 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms