Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.8■□□□□ 0.6
Mmp3P28862 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Mmp3P28862 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp3P28862 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp3P28862 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp3P28862 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp3P28862 Il3ra-202ENSMUST00000223589 738 ntBASIC18.79■□□□□ 0.6
Mmp3P28862 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp3P28862 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp3P28862 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp3P28862 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp3P28862 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp3P28862 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.79■□□□□ 0.6
Mmp3P28862 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp3P28862 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Mmp3P28862 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp3P28862 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp3P28862 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Mmp3P28862 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp3P28862 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.78■□□□□ 0.6
Mmp3P28862 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp3P28862 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp3P28862 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp3P28862 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Mmp3P28862 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp3P28862 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp3P28862 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
Mmp3P28862 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp3P28862 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Mmp3P28862 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp3P28862 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp3P28862 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp3P28862 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Mmp3P28862 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp3P28862 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp3P28862 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Mmp3P28862 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Mmp3P28862 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.77■□□□□ 0.6
Mmp3P28862 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.77■□□□□ 0.6
Mmp3P28862 Mir8112-201ENSMUST00000184382 131 ntBASIC18.77■□□□□ 0.6
Mmp3P28862 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.77■□□□□ 0.6
Mmp3P28862 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp3P28862 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp3P28862 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp3P28862 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mmp3P28862 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Mmp3P28862 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Mmp3P28862 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mmp3P28862 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp3P28862 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp3P28862 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp3P28862 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.76■□□□□ 0.59
Mmp3P28862 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.76■□□□□ 0.59
Mmp3P28862 AA414768-201ENSMUST00000121924 1257 ntBASIC18.76■□□□□ 0.59
Mmp3P28862 Gm13474-201ENSMUST00000122466 815 ntBASIC18.76■□□□□ 0.59
Mmp3P28862 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp3P28862 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Mmp3P28862 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.76■□□□□ 0.59
Mmp3P28862 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp3P28862 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp3P28862 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp3P28862 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp3P28862 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp3P28862 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp3P28862 Grk6-206ENSMUST00000224995 2971 ntBASIC18.75■□□□□ 0.59
Mmp3P28862 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Mmp3P28862 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp3P28862 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp3P28862 Gm17661-201ENSMUST00000170317 270 ntBASIC18.75■□□□□ 0.59
Mmp3P28862 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp3P28862 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp3P28862 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Mmp3P28862 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp3P28862 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp3P28862 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp3P28862 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp3P28862 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp3P28862 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp3P28862 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp3P28862 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
Mmp3P28862 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp3P28862 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp3P28862 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp3P28862 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp3P28862 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.74■□□□□ 0.59
Mmp3P28862 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp3P28862 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Mmp3P28862 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Mmp3P28862 Gm6345-202ENSMUST00000180900 204 ntBASIC18.74■□□□□ 0.59
Mmp3P28862 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp3P28862 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp3P28862 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.74■□□□□ 0.59
Mmp3P28862 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp3P28862 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp3P28862 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp3P28862 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Mmp3P28862 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp3P28862 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Mmp3P28862 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp3P28862 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms