Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Tpm3P21107 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Tpm3P21107 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.69■□□□□ 0.74
Tpm3P21107 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm3P21107 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Tpm3P21107 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.69■□□□□ 0.74
Tpm3P21107 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Tpm3P21107 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm3P21107 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm3P21107 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Tpm3P21107 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm3P21107 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm3P21107 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm3P21107 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm3P21107 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm3P21107 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm3P21107 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Tpm3P21107 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Tpm3P21107 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm3P21107 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm3P21107 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.68■□□□□ 0.74
Tpm3P21107 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.68■□□□□ 0.74
Tpm3P21107 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm3P21107 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm3P21107 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm3P21107 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm3P21107 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm3P21107 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm3P21107 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm3P21107 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm3P21107 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm3P21107 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Tpm3P21107 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.67■□□□□ 0.74
Tpm3P21107 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm3P21107 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm3P21107 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.67■□□□□ 0.74
Tpm3P21107 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Tpm3P21107 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm3P21107 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm3P21107 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm3P21107 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm3P21107 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Tpm3P21107 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Tpm3P21107 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Tpm3P21107 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm3P21107 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm3P21107 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm3P21107 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm3P21107 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.66■□□□□ 0.74
Tpm3P21107 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm3P21107 Mir7075-201ENSMUST00000184187 82 ntBASIC19.66■□□□□ 0.74
Tpm3P21107 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Tpm3P21107 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm3P21107 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm3P21107 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm3P21107 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm3P21107 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm3P21107 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm3P21107 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm3P21107 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm3P21107 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm3P21107 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Tpm3P21107 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm3P21107 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm3P21107 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.65■□□□□ 0.74
Tpm3P21107 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm3P21107 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm3P21107 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm3P21107 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm3P21107 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm3P21107 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Tpm3P21107 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm3P21107 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm3P21107 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Tpm3P21107 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm3P21107 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm3P21107 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Tpm3P21107 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Tpm3P21107 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm3P21107 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.64■□□□□ 0.73
Tpm3P21107 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm3P21107 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm3P21107 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm3P21107 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.64■□□□□ 0.73
Tpm3P21107 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm3P21107 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm3P21107 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Tpm3P21107 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm3P21107 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm3P21107 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm3P21107 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm3P21107 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm3P21107 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.63■□□□□ 0.73
Tpm3P21107 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm3P21107 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm3P21107 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm3P21107 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm3P21107 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm3P21107 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm3P21107 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms