Protein–RNA interactions for Protein: P10287

Cdh3, Cadherin-3, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh3P10287 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh3P10287 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh3P10287 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh3P10287 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh3P10287 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh3P10287 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh3P10287 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh3P10287 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh3P10287 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh3P10287 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh3P10287 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh3P10287 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh3P10287 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh3P10287 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh3P10287 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.21■□□□□ 0.19
Cdh3P10287 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.21■□□□□ 0.19
Cdh3P10287 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh3P10287 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Cdh3P10287 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.21■□□□□ 0.19
Cdh3P10287 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh3P10287 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.21■□□□□ 0.19
Cdh3P10287 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh3P10287 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh3P10287 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh3P10287 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh3P10287 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
Cdh3P10287 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cdh3P10287 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Cdh3P10287 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cdh3P10287 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cdh3P10287 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh3P10287 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh3P10287 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh3P10287 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh3P10287 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cdh3P10287 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh3P10287 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh3P10287 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh3P10287 Gm13148-201ENSMUST00000118892 745 ntBASIC16.2■□□□□ 0.18
Cdh3P10287 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh3P10287 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh3P10287 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.2■□□□□ 0.18
Cdh3P10287 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.2■□□□□ 0.18
Cdh3P10287 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cdh3P10287 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh3P10287 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh3P10287 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.2■□□□□ 0.18
Cdh3P10287 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh3P10287 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh3P10287 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cdh3P10287 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cdh3P10287 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh3P10287 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh3P10287 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh3P10287 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cdh3P10287 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh3P10287 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.19■□□□□ 0.18
Cdh3P10287 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh3P10287 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh3P10287 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cdh3P10287 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh3P10287 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh3P10287 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Cdh3P10287 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.19■□□□□ 0.18
Cdh3P10287 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh3P10287 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh3P10287 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh3P10287 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh3P10287 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh3P10287 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.19■□□□□ 0.18
Cdh3P10287 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh3P10287 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh3P10287 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh3P10287 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.19■□□□□ 0.18
Cdh3P10287 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.18■□□□□ 0.18
Cdh3P10287 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh3P10287 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.18■□□□□ 0.18
Cdh3P10287 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.18■□□□□ 0.18
Cdh3P10287 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh3P10287 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh3P10287 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh3P10287 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh3P10287 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cdh3P10287 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh3P10287 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh3P10287 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh3P10287 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.18■□□□□ 0.18
Cdh3P10287 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.18■□□□□ 0.18
Cdh3P10287 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh3P10287 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.18■□□□□ 0.18
Cdh3P10287 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh3P10287 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh3P10287 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdh3P10287 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.18■□□□□ 0.18
Cdh3P10287 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh3P10287 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh3P10287 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh3P10287 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.17■□□□□ 0.18
Cdh3P10287 Gm5408-201ENSMUST00000197998 747 ntBASIC16.17■□□□□ 0.18
Cdh3P10287 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms