Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.66□□□□□ -0.22
Ccl1P10146 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ccl1P10146 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Ccl1P10146 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ccl1P10146 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 Gm11421-201ENSMUST00000122124 294 ntBASIC13.66□□□□□ -0.22
Ccl1P10146 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.66□□□□□ -0.22
Ccl1P10146 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.66□□□□□ -0.22
Ccl1P10146 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.66□□□□□ -0.22
Ccl1P10146 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccl1P10146 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ccl1P10146 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl1P10146 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ccl1P10146 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl1P10146 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccl1P10146 Haglr-201ENSMUST00000100000 2085 ntBASIC13.65□□□□□ -0.22
Ccl1P10146 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccl1P10146 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl1P10146 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl1P10146 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl1P10146 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl1P10146 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl1P10146 Gm27801-201ENSMUST00000184174 223 ntBASIC13.65□□□□□ -0.22
Ccl1P10146 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl1P10146 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Ccl1P10146 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl1P10146 Gm5812-201ENSMUST00000061073 957 ntBASIC13.65□□□□□ -0.22
Ccl1P10146 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccl1P10146 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl1P10146 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ccl1P10146 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ccl1P10146 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccl1P10146 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl1P10146 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl1P10146 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccl1P10146 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccl1P10146 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl1P10146 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl1P10146 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccl1P10146 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl1P10146 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl1P10146 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl1P10146 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl1P10146 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl1P10146 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl1P10146 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl1P10146 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl1P10146 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl1P10146 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ccl1P10146 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl1P10146 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl1P10146 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Ccl1P10146 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl1P10146 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl1P10146 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl1P10146 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl1P10146 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl1P10146 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccl1P10146 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl1P10146 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccl1P10146 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ccl1P10146 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ccl1P10146 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl1P10146 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl1P10146 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.63□□□□□ -0.23
Ccl1P10146 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccl1P10146 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl1P10146 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl1P10146 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl1P10146 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl1P10146 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl1P10146 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl1P10146 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl1P10146 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl1P10146 Gm15546-201ENSMUST00000122095 826 ntBASIC13.63□□□□□ -0.23
Ccl1P10146 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl1P10146 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Ccl1P10146 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl1P10146 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.63□□□□□ -0.23
Ccl1P10146 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl1P10146 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl1P10146 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl1P10146 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl1P10146 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl1P10146 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl1P10146 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl1P10146 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ccl1P10146 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms