Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.77■□□□□ 0.6
Hoxc8P09025 Gm28033-201ENSMUST00000184224 96 ntBASIC18.77■□□□□ 0.6
Hoxc8P09025 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Hoxc8P09025 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc8P09025 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc8P09025 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc8P09025 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc8P09025 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Hoxc8P09025 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc8P09025 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc8P09025 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Hoxc8P09025 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hoxc8P09025 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hoxc8P09025 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hoxc8P09025 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc8P09025 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc8P09025 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Hoxc8P09025 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc8P09025 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc8P09025 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Hoxc8P09025 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.76■□□□□ 0.59
Hoxc8P09025 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.76■□□□□ 0.59
Hoxc8P09025 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc8P09025 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc8P09025 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc8P09025 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Hoxc8P09025 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc8P09025 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc8P09025 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc8P09025 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Hoxc8P09025 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Hoxc8P09025 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.75■□□□□ 0.59
Hoxc8P09025 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.75■□□□□ 0.59
Hoxc8P09025 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc8P09025 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
Hoxc8P09025 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc8P09025 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc8P09025 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.75■□□□□ 0.59
Hoxc8P09025 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc8P09025 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Hoxc8P09025 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc8P09025 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc8P09025 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc8P09025 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.74■□□□□ 0.59
Hoxc8P09025 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc8P09025 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Hoxc8P09025 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc8P09025 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Hoxc8P09025 Gm37722-201ENSMUST00000193757 208 ntBASIC18.74■□□□□ 0.59
Hoxc8P09025 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc8P09025 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Hoxc8P09025 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc8P09025 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc8P09025 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc8P09025 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxc8P09025 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.73■□□□□ 0.59
Hoxc8P09025 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxc8P09025 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.73■□□□□ 0.59
Hoxc8P09025 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Hoxc8P09025 Gm27357-201ENSMUST00000183754 135 ntBASIC18.73■□□□□ 0.59
Hoxc8P09025 Gm17807-201ENSMUST00000186869 298 ntBASIC18.73■□□□□ 0.59
Hoxc8P09025 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxc8P09025 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxc8P09025 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Hoxc8P09025 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxc8P09025 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.73■□□□□ 0.59
Hoxc8P09025 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxc8P09025 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxc8P09025 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxc8P09025 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.72■□□□□ 0.59
Hoxc8P09025 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Hoxc8P09025 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Hoxc8P09025 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxc8P09025 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.72■□□□□ 0.59
Hoxc8P09025 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Hoxc8P09025 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc8P09025 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc8P09025 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc8P09025 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc8P09025 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Hoxc8P09025 Gm18669-201ENSMUST00000216049 778 ntBASIC18.71■□□□□ 0.59
Hoxc8P09025 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Hoxc8P09025 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc8P09025 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc8P09025 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc8P09025 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Hoxc8P09025 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.71■□□□□ 0.59
Hoxc8P09025 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Hoxc8P09025 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.71■□□□□ 0.58
Hoxc8P09025 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc8P09025 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Hoxc8P09025 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc8P09025 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc8P09025 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc8P09025 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc8P09025 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc8P09025 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Hoxc8P09025 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.7■□□□□ 0.58
Hoxc8P09025 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.7■□□□□ 0.58
Hoxc8P09025 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms