Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc1P07903 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc1P07903 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Ercc1P07903 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
Ercc1P07903 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc1P07903 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc1P07903 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc1P07903 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.7□□□□□ -0.06
Ercc1P07903 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ercc1P07903 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.7□□□□□ -0.06
Ercc1P07903 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc1P07903 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc1P07903 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc1P07903 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc1P07903 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.69□□□□□ -0.06
Ercc1P07903 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc1P07903 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc1P07903 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc1P07903 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc1P07903 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc1P07903 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc1P07903 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ercc1P07903 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.69□□□□□ -0.06
Ercc1P07903 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.69□□□□□ -0.06
Ercc1P07903 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc1P07903 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc1P07903 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc1P07903 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Ercc1P07903 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc1P07903 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc1P07903 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.68□□□□□ -0.06
Ercc1P07903 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc1P07903 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc1P07903 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc1P07903 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc1P07903 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.68□□□□□ -0.06
Ercc1P07903 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc1P07903 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc1P07903 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc1P07903 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc1P07903 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.68□□□□□ -0.06
Ercc1P07903 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc1P07903 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc1P07903 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.68□□□□□ -0.06
Ercc1P07903 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc1P07903 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc1P07903 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.68□□□□□ -0.06
Ercc1P07903 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc1P07903 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc1P07903 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc1P07903 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc1P07903 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc1P07903 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc1P07903 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ercc1P07903 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ercc1P07903 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ercc1P07903 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.67□□□□□ -0.06
Ercc1P07903 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ercc1P07903 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.67□□□□□ -0.06
Ercc1P07903 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ercc1P07903 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
Ercc1P07903 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ercc1P07903 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.67□□□□□ -0.06
Ercc1P07903 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.67□□□□□ -0.06
Ercc1P07903 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ercc1P07903 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ercc1P07903 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ercc1P07903 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ercc1P07903 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ercc1P07903 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ercc1P07903 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ercc1P07903 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ercc1P07903 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ercc1P07903 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ercc1P07903 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
Ercc1P07903 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ercc1P07903 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ercc1P07903 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ercc1P07903 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.66□□□□□ -0.06
Ercc1P07903 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ercc1P07903 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ercc1P07903 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ercc1P07903 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ercc1P07903 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ercc1P07903 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ercc1P07903 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ercc1P07903 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ercc1P07903 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Ercc1P07903 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ercc1P07903 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Ercc1P07903 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ercc1P07903 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ercc1P07903 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.66□□□□□ -0.06
Ercc1P07903 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ercc1P07903 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ercc1P07903 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ercc1P07903 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.66□□□□□ -0.06
Ercc1P07903 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ercc1P07903 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.66□□□□□ -0.06
Ercc1P07903 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms