Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
H3f3cP02301 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H3f3cP02301 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H3f3cP02301 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
H3f3cP02301 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H3f3cP02301 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
H3f3cP02301 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H3f3cP02301 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H3f3cP02301 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H3f3cP02301 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.04■□□□□ -0
H3f3cP02301 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H3f3cP02301 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H3f3cP02301 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H3f3cP02301 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H3f3cP02301 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
H3f3cP02301 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H3f3cP02301 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.04■□□□□ -0
H3f3cP02301 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H3f3cP02301 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
H3f3cP02301 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H3f3cP02301 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
H3f3cP02301 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
H3f3cP02301 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
H3f3cP02301 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
H3f3cP02301 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.03■□□□□ -0
H3f3cP02301 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.03■□□□□ -0
H3f3cP02301 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.03■□□□□ -0
H3f3cP02301 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H3f3cP02301 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.03■□□□□ -0
H3f3cP02301 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H3f3cP02301 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.03■□□□□ -0
H3f3cP02301 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H3f3cP02301 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H3f3cP02301 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H3f3cP02301 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H3f3cP02301 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H3f3cP02301 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.02■□□□□ -0
H3f3cP02301 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H3f3cP02301 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.02■□□□□ -0
H3f3cP02301 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.02■□□□□ -0
H3f3cP02301 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.02■□□□□ -0
H3f3cP02301 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.02■□□□□ -0
H3f3cP02301 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
H3f3cP02301 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.02■□□□□ -0
H3f3cP02301 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.02■□□□□ -0
H3f3cP02301 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.02■□□□□ -0
H3f3cP02301 Gm13168-201ENSMUST00000121771 632 ntBASIC15.02■□□□□ -0
H3f3cP02301 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.02■□□□□ -0
H3f3cP02301 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H3f3cP02301 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.02■□□□□ -0
H3f3cP02301 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H3f3cP02301 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
H3f3cP02301 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
H3f3cP02301 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
H3f3cP02301 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H3f3cP02301 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
H3f3cP02301 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
H3f3cP02301 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.01□□□□□ -0.01
H3f3cP02301 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.01□□□□□ -0.01
H3f3cP02301 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H3f3cP02301 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H3f3cP02301 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H3f3cP02301 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H3f3cP02301 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
H3f3cP02301 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H3f3cP02301 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
H3f3cP02301 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
H3f3cP02301 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.01□□□□□ -0.01
H3f3cP02301 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.01□□□□□ -0.01
H3f3cP02301 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.01□□□□□ -0.01
H3f3cP02301 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H3f3cP02301 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
H3f3cP02301 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H3f3cP02301 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
H3f3cP02301 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H3f3cP02301 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.01□□□□□ -0.01
H3f3cP02301 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H3f3cP02301 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H3f3cP02301 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H3f3cP02301 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H3f3cP02301 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
H3f3cP02301 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15□□□□□ -0.01
H3f3cP02301 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H3f3cP02301 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H3f3cP02301 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H3f3cP02301 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H3f3cP02301 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15□□□□□ -0.01
H3f3cP02301 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15□□□□□ -0.01
H3f3cP02301 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15□□□□□ -0.01
H3f3cP02301 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15□□□□□ -0.01
H3f3cP02301 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15□□□□□ -0.01
H3f3cP02301 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H3f3cP02301 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H3f3cP02301 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
H3f3cP02301 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
H3f3cP02301 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
H3f3cP02301 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H3f3cP02301 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H3f3cP02301 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H3f3cP02301 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms