Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d1aO88890 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d1aO88890 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d1aO88890 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d1aO88890 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d1aO88890 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sh2d1aO88890 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d1aO88890 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Sh2d1aO88890 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Sh2d1aO88890 Gm5408-201ENSMUST00000197998 747 ntBASIC12.4□□□□□ -0.42
Sh2d1aO88890 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d1aO88890 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d1aO88890 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d1aO88890 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d1aO88890 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.4□□□□□ -0.42
Sh2d1aO88890 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sh2d1aO88890 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sh2d1aO88890 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d1aO88890 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sh2d1aO88890 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.39□□□□□ -0.43
Sh2d1aO88890 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Gm2399-201ENSMUST00000104944 225 ntBASIC12.38□□□□□ -0.43
Sh2d1aO88890 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.38□□□□□ -0.43
Sh2d1aO88890 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sh2d1aO88890 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Sh2d1aO88890 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Sh2d1aO88890 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms