Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Best1O88870 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Best1O88870 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Best1O88870 Gm16061-201ENSMUST00000122167 857 ntBASIC16.87■□□□□ 0.29
Best1O88870 Gm13474-201ENSMUST00000122466 815 ntBASIC16.87■□□□□ 0.29
Best1O88870 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Best1O88870 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Best1O88870 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Best1O88870 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Best1O88870 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Best1O88870 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Best1O88870 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Best1O88870 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Best1O88870 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Best1O88870 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Best1O88870 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
Best1O88870 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Best1O88870 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Best1O88870 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Best1O88870 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Best1O88870 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.86■□□□□ 0.29
Best1O88870 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Best1O88870 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Best1O88870 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Best1O88870 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.86■□□□□ 0.29
Best1O88870 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.86■□□□□ 0.29
Best1O88870 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Best1O88870 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Best1O88870 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Best1O88870 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Best1O88870 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Best1O88870 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Best1O88870 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Best1O88870 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Best1O88870 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Best1O88870 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Best1O88870 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Best1O88870 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Best1O88870 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Best1O88870 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Best1O88870 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Best1O88870 Gm8969-201ENSMUST00000199694 526 ntBASIC16.85■□□□□ 0.29
Best1O88870 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Best1O88870 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.85■□□□□ 0.29
Best1O88870 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Best1O88870 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Best1O88870 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Best1O88870 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Best1O88870 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Best1O88870 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Best1O88870 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Best1O88870 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Best1O88870 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Best1O88870 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Best1O88870 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Best1O88870 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Best1O88870 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Best1O88870 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Best1O88870 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Best1O88870 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Best1O88870 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Best1O88870 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.84■□□□□ 0.29
Best1O88870 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Best1O88870 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Best1O88870 Mir5130-201ENSMUST00000175160 84 ntBASIC16.84■□□□□ 0.29
Best1O88870 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.84■□□□□ 0.29
Best1O88870 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Best1O88870 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Best1O88870 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Best1O88870 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Best1O88870 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Best1O88870 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Best1O88870 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Best1O88870 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.84■□□□□ 0.29
Best1O88870 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.84■□□□□ 0.29
Best1O88870 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Best1O88870 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Best1O88870 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Best1O88870 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Best1O88870 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.83■□□□□ 0.28
Best1O88870 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.83■□□□□ 0.28
Best1O88870 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.83■□□□□ 0.28
Best1O88870 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Best1O88870 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Best1O88870 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Best1O88870 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Best1O88870 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Best1O88870 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Best1O88870 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Best1O88870 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Best1O88870 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Best1O88870 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.82■□□□□ 0.28
Best1O88870 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Best1O88870 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Best1O88870 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Best1O88870 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Best1O88870 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Best1O88870 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Best1O88870 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Best1O88870 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms