Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.79■□□□□ 0.28
Hcn1O88704 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcn1O88704 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcn1O88704 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hcn1O88704 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcn1O88704 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Hcn1O88704 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.79■□□□□ 0.28
Hcn1O88704 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hcn1O88704 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn1O88704 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn1O88704 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn1O88704 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn1O88704 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Hcn1O88704 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn1O88704 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn1O88704 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn1O88704 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn1O88704 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.78■□□□□ 0.28
Hcn1O88704 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn1O88704 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn1O88704 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn1O88704 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Hcn1O88704 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn1O88704 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hcn1O88704 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcn1O88704 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Hcn1O88704 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hcn1O88704 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcn1O88704 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcn1O88704 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.77■□□□□ 0.28
Hcn1O88704 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcn1O88704 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcn1O88704 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hcn1O88704 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hcn1O88704 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Hcn1O88704 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.77■□□□□ 0.27
Hcn1O88704 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Hcn1O88704 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hcn1O88704 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hcn1O88704 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hcn1O88704 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hcn1O88704 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.77■□□□□ 0.27
Hcn1O88704 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.77■□□□□ 0.27
Hcn1O88704 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hcn1O88704 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn1O88704 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn1O88704 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn1O88704 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn1O88704 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn1O88704 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn1O88704 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn1O88704 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn1O88704 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.76■□□□□ 0.27
Hcn1O88704 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn1O88704 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.76■□□□□ 0.27
Hcn1O88704 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn1O88704 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn1O88704 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcn1O88704 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.75■□□□□ 0.27
Hcn1O88704 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn1O88704 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn1O88704 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn1O88704 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn1O88704 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.75■□□□□ 0.27
Hcn1O88704 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.75■□□□□ 0.27
Hcn1O88704 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Hcn1O88704 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Hcn1O88704 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.75■□□□□ 0.27
Hcn1O88704 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn1O88704 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn1O88704 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.75■□□□□ 0.27
Hcn1O88704 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn1O88704 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn1O88704 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn1O88704 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn1O88704 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn1O88704 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hcn1O88704 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.74■□□□□ 0.27
Hcn1O88704 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.74■□□□□ 0.27
Hcn1O88704 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn1O88704 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn1O88704 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn1O88704 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Hcn1O88704 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.74■□□□□ 0.27
Hcn1O88704 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Hcn1O88704 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.74■□□□□ 0.27
Hcn1O88704 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn1O88704 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn1O88704 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn1O88704 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn1O88704 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Hcn1O88704 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Hcn1O88704 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hcn1O88704 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn1O88704 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn1O88704 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.73■□□□□ 0.27
Hcn1O88704 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn1O88704 Gm11249-201ENSMUST00000117071 859 ntBASIC16.73■□□□□ 0.27
Hcn1O88704 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hcn1O88704 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms