Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sema3fO88632 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sema3fO88632 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sema3fO88632 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sema3fO88632 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.22■□□□□ 0.83
Sema3fO88632 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.22■□□□□ 0.83
Sema3fO88632 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sema3fO88632 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.22■□□□□ 0.83
Sema3fO88632 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Sema3fO88632 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sema3fO88632 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Sema3fO88632 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Sema3fO88632 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Sema3fO88632 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sema3fO88632 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sema3fO88632 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sema3fO88632 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sema3fO88632 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sema3fO88632 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sema3fO88632 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Sema3fO88632 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sema3fO88632 Mir5130-201ENSMUST00000175160 84 ntBASIC20.21■□□□□ 0.83
Sema3fO88632 Gm2274-201ENSMUST00000184539 609 ntBASIC20.21■□□□□ 0.83
Sema3fO88632 Gm8969-201ENSMUST00000199694 526 ntBASIC20.21■□□□□ 0.83
Sema3fO88632 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sema3fO88632 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sema3fO88632 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.21■□□□□ 0.83
Sema3fO88632 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sema3fO88632 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sema3fO88632 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Sema3fO88632 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sema3fO88632 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Sema3fO88632 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
Sema3fO88632 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
Sema3fO88632 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
Sema3fO88632 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Sema3fO88632 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sema3fO88632 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sema3fO88632 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sema3fO88632 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Sema3fO88632 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sema3fO88632 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sema3fO88632 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sema3fO88632 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sema3fO88632 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sema3fO88632 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sema3fO88632 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sema3fO88632 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Sema3fO88632 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sema3fO88632 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.2■□□□□ 0.82
Sema3fO88632 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sema3fO88632 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Sema3fO88632 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.2■□□□□ 0.82
Sema3fO88632 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sema3fO88632 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sema3fO88632 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Sema3fO88632 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sema3fO88632 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sema3fO88632 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
Sema3fO88632 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sema3fO88632 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sema3fO88632 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sema3fO88632 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sema3fO88632 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Sema3fO88632 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.19■□□□□ 0.82
Sema3fO88632 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.19■□□□□ 0.82
Sema3fO88632 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Sema3fO88632 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sema3fO88632 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sema3fO88632 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sema3fO88632 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.19■□□□□ 0.82
Sema3fO88632 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sema3fO88632 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sema3fO88632 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sema3fO88632 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sema3fO88632 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sema3fO88632 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sema3fO88632 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sema3fO88632 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sema3fO88632 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.18■□□□□ 0.82
Sema3fO88632 Gm7370-201ENSMUST00000219471 767 ntBASIC20.18■□□□□ 0.82
Sema3fO88632 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Sema3fO88632 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sema3fO88632 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sema3fO88632 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sema3fO88632 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sema3fO88632 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sema3fO88632 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sema3fO88632 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Sema3fO88632 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Sema3fO88632 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sema3fO88632 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sema3fO88632 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Sema3fO88632 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sema3fO88632 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Sema3fO88632 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sema3fO88632 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Sema3fO88632 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sema3fO88632 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Sema3fO88632 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms