Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Lmx1bO88609 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lmx1bO88609 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Lmx1bO88609 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Lmx1bO88609 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Lmx1bO88609 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lmx1bO88609 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Lmx1bO88609 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lmx1bO88609 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lmx1bO88609 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lmx1bO88609 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lmx1bO88609 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.86■□□□□ 0.13
Lmx1bO88609 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lmx1bO88609 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Lmx1bO88609 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lmx1bO88609 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lmx1bO88609 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lmx1bO88609 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lmx1bO88609 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Lmx1bO88609 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lmx1bO88609 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lmx1bO88609 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.85■□□□□ 0.13
Lmx1bO88609 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
Lmx1bO88609 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.85■□□□□ 0.13
Lmx1bO88609 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Lmx1bO88609 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lmx1bO88609 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Lmx1bO88609 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lmx1bO88609 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Lmx1bO88609 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Lmx1bO88609 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.85■□□□□ 0.13
Lmx1bO88609 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lmx1bO88609 Timm23-208ENSMUST00000226683 750 ntBASIC15.85■□□□□ 0.13
Lmx1bO88609 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lmx1bO88609 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lmx1bO88609 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lmx1bO88609 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lmx1bO88609 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Lmx1bO88609 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Lmx1bO88609 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Lmx1bO88609 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lmx1bO88609 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lmx1bO88609 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.84■□□□□ 0.13
Lmx1bO88609 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.84■□□□□ 0.13
Lmx1bO88609 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lmx1bO88609 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lmx1bO88609 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lmx1bO88609 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lmx1bO88609 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Lmx1bO88609 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.84■□□□□ 0.13
Lmx1bO88609 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Lmx1bO88609 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Lmx1bO88609 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Lmx1bO88609 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.83■□□□□ 0.13
Lmx1bO88609 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Lmx1bO88609 Gm12085-201ENSMUST00000119263 940 ntBASIC15.83■□□□□ 0.12
Lmx1bO88609 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Lmx1bO88609 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.83■□□□□ 0.12
Lmx1bO88609 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Lmx1bO88609 Gm3375-201ENSMUST00000203929 796 ntBASIC15.83■□□□□ 0.12
Lmx1bO88609 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.83■□□□□ 0.12
Lmx1bO88609 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lmx1bO88609 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lmx1bO88609 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lmx1bO88609 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lmx1bO88609 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lmx1bO88609 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Lmx1bO88609 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lmx1bO88609 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lmx1bO88609 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Lmx1bO88609 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Lmx1bO88609 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lmx1bO88609 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lmx1bO88609 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lmx1bO88609 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lmx1bO88609 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lmx1bO88609 Gm6433-201ENSMUST00000118634 875 ntBASIC15.82■□□□□ 0.12
Lmx1bO88609 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.82■□□□□ 0.12
Lmx1bO88609 Gm11539-201ENSMUST00000119837 557 ntBASIC15.82■□□□□ 0.12
Lmx1bO88609 Gm13436-201ENSMUST00000120418 567 ntBASIC15.82■□□□□ 0.12
Lmx1bO88609 Gm10517-202ENSMUST00000192970 758 ntBASIC15.82■□□□□ 0.12
Lmx1bO88609 Odf3b-204ENSMUST00000227834 930 ntBASIC15.82■□□□□ 0.12
Lmx1bO88609 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lmx1bO88609 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lmx1bO88609 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lmx1bO88609 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lmx1bO88609 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Lmx1bO88609 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lmx1bO88609 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Lmx1bO88609 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lmx1bO88609 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.82■□□□□ 0.12
Lmx1bO88609 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lmx1bO88609 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lmx1bO88609 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lmx1bO88609 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.82■□□□□ 0.12
Lmx1bO88609 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lmx1bO88609 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lmx1bO88609 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lmx1bO88609 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.81■□□□□ 0.12
Lmx1bO88609 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms