Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tspan6O70401 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.11■□□□□ 0.33
Tspan6O70401 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tspan6O70401 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tspan6O70401 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tspan6O70401 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tspan6O70401 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tspan6O70401 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tspan6O70401 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tspan6O70401 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tspan6O70401 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tspan6O70401 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.1■□□□□ 0.33
Tspan6O70401 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tspan6O70401 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tspan6O70401 Il3ra-202ENSMUST00000223589 738 ntBASIC17.1■□□□□ 0.33
Tspan6O70401 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tspan6O70401 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tspan6O70401 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tspan6O70401 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tspan6O70401 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tspan6O70401 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tspan6O70401 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tspan6O70401 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tspan6O70401 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tspan6O70401 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tspan6O70401 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tspan6O70401 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.09■□□□□ 0.33
Tspan6O70401 Gm7367-201ENSMUST00000057611 492 ntBASIC17.09■□□□□ 0.33
Tspan6O70401 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tspan6O70401 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tspan6O70401 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tspan6O70401 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tspan6O70401 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Tspan6O70401 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tspan6O70401 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tspan6O70401 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tspan6O70401 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tspan6O70401 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tspan6O70401 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.08■□□□□ 0.33
Tspan6O70401 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tspan6O70401 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tspan6O70401 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tspan6O70401 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tspan6O70401 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tspan6O70401 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tspan6O70401 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.08■□□□□ 0.32
Tspan6O70401 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.08■□□□□ 0.32
Tspan6O70401 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tspan6O70401 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tspan6O70401 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tspan6O70401 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tspan6O70401 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tspan6O70401 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tspan6O70401 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tspan6O70401 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.07■□□□□ 0.32
Tspan6O70401 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tspan6O70401 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Tspan6O70401 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tspan6O70401 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tspan6O70401 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.07■□□□□ 0.32
Tspan6O70401 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tspan6O70401 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tspan6O70401 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tspan6O70401 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tspan6O70401 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.07■□□□□ 0.32
Tspan6O70401 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tspan6O70401 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tspan6O70401 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tspan6O70401 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tspan6O70401 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tspan6O70401 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tspan6O70401 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.06■□□□□ 0.32
Tspan6O70401 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tspan6O70401 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tspan6O70401 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tspan6O70401 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tspan6O70401 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Tspan6O70401 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.06■□□□□ 0.32
Tspan6O70401 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tspan6O70401 Gm6345-202ENSMUST00000180900 204 ntBASIC17.06■□□□□ 0.32
Tspan6O70401 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.06■□□□□ 0.32
Tspan6O70401 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tspan6O70401 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tspan6O70401 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Tspan6O70401 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tspan6O70401 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Tspan6O70401 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tspan6O70401 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tspan6O70401 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tspan6O70401 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tspan6O70401 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tspan6O70401 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Tspan6O70401 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tspan6O70401 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tspan6O70401 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tspan6O70401 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tspan6O70401 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Tspan6O70401 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tspan6O70401 Gm25016-201ENSMUST00000158399 131 ntBASIC17.05■□□□□ 0.32
Tspan6O70401 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms