Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim3O70209 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim3O70209 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim3O70209 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim3O70209 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim3O70209 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim3O70209 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim3O70209 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.92■□□□□ 0.14
Pdlim3O70209 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim3O70209 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Pdlim3O70209 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.92■□□□□ 0.14
Pdlim3O70209 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Pdlim3O70209 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim3O70209 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim3O70209 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim3O70209 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pdlim3O70209 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pdlim3O70209 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim3O70209 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pdlim3O70209 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.91■□□□□ 0.14
Pdlim3O70209 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim3O70209 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Pdlim3O70209 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim3O70209 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Pdlim3O70209 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pdlim3O70209 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim3O70209 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pdlim3O70209 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Pdlim3O70209 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim3O70209 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim3O70209 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim3O70209 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pdlim3O70209 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pdlim3O70209 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim3O70209 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim3O70209 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim3O70209 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim3O70209 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim3O70209 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim3O70209 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim3O70209 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim3O70209 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pdlim3O70209 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim3O70209 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim3O70209 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim3O70209 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim3O70209 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim3O70209 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim3O70209 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim3O70209 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim3O70209 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.9■□□□□ 0.14
Pdlim3O70209 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.9■□□□□ 0.14
Pdlim3O70209 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Pdlim3O70209 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim3O70209 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim3O70209 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim3O70209 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.9■□□□□ 0.14
Pdlim3O70209 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.9■□□□□ 0.14
Pdlim3O70209 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pdlim3O70209 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim3O70209 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim3O70209 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
Pdlim3O70209 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim3O70209 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Pdlim3O70209 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim3O70209 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim3O70209 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim3O70209 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.89■□□□□ 0.13
Pdlim3O70209 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pdlim3O70209 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Pdlim3O70209 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim3O70209 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim3O70209 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim3O70209 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Pdlim3O70209 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim3O70209 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pdlim3O70209 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim3O70209 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pdlim3O70209 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim3O70209 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim3O70209 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim3O70209 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim3O70209 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim3O70209 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Pdlim3O70209 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim3O70209 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.88■□□□□ 0.13
Pdlim3O70209 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim3O70209 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim3O70209 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.88■□□□□ 0.13
Pdlim3O70209 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim3O70209 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim3O70209 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim3O70209 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim3O70209 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim3O70209 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim3O70209 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim3O70209 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim3O70209 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.87■□□□□ 0.13
Pdlim3O70209 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim3O70209 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms