Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh5O55240 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh5O55240 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh5O55240 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
Rdh5O55240 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh5O55240 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.62■□□□□ 0.25
Rdh5O55240 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh5O55240 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh5O55240 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rdh5O55240 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.62■□□□□ 0.25
Rdh5O55240 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rdh5O55240 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.61■□□□□ 0.25
Rdh5O55240 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rdh5O55240 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.61■□□□□ 0.25
Rdh5O55240 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rdh5O55240 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rdh5O55240 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rdh5O55240 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Rdh5O55240 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rdh5O55240 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rdh5O55240 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rdh5O55240 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rdh5O55240 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rdh5O55240 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh5O55240 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh5O55240 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Rdh5O55240 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh5O55240 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh5O55240 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh5O55240 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh5O55240 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.6■□□□□ 0.25
Rdh5O55240 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh5O55240 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh5O55240 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh5O55240 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rdh5O55240 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh5O55240 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh5O55240 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.6■□□□□ 0.25
Rdh5O55240 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh5O55240 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh5O55240 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rdh5O55240 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rdh5O55240 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Rdh5O55240 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh5O55240 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh5O55240 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh5O55240 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh5O55240 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh5O55240 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.59■□□□□ 0.25
Rdh5O55240 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Rdh5O55240 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rdh5O55240 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.59■□□□□ 0.25
Rdh5O55240 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.59■□□□□ 0.25
Rdh5O55240 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh5O55240 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh5O55240 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh5O55240 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh5O55240 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Rdh5O55240 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh5O55240 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh5O55240 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rdh5O55240 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rdh5O55240 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rdh5O55240 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rdh5O55240 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Rdh5O55240 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Rdh5O55240 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rdh5O55240 Gm13401-201ENSMUST00000117074 291 ntBASIC16.58■□□□□ 0.24
Rdh5O55240 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.58■□□□□ 0.24
Rdh5O55240 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.58■□□□□ 0.24
Rdh5O55240 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rdh5O55240 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rdh5O55240 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Rdh5O55240 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rdh5O55240 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rdh5O55240 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rdh5O55240 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rdh5O55240 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rdh5O55240 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rdh5O55240 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rdh5O55240 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rdh5O55240 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh5O55240 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh5O55240 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh5O55240 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh5O55240 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.57■□□□□ 0.24
Rdh5O55240 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Rdh5O55240 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh5O55240 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh5O55240 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh5O55240 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rdh5O55240 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh5O55240 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh5O55240 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh5O55240 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh5O55240 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.57■□□□□ 0.24
Rdh5O55240 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh5O55240 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh5O55240 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh5O55240 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms