Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1bO55017 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1bO55017 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1bO55017 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cacna1bO55017 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.88■□□□□ 0.29
Cacna1bO55017 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1bO55017 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1bO55017 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1bO55017 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.88■□□□□ 0.29
Cacna1bO55017 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cacna1bO55017 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1bO55017 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1bO55017 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1bO55017 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cacna1bO55017 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1bO55017 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1bO55017 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1bO55017 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1bO55017 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1bO55017 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1bO55017 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1bO55017 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.88■□□□□ 0.29
Cacna1bO55017 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1bO55017 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.88■□□□□ 0.29
Cacna1bO55017 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cacna1bO55017 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1bO55017 Mir8098-201ENSMUST00000184011 137 ntBASIC16.87■□□□□ 0.29
Cacna1bO55017 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1bO55017 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1bO55017 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Cacna1bO55017 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.87■□□□□ 0.29
Cacna1bO55017 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1bO55017 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1bO55017 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1bO55017 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Cacna1bO55017 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.87■□□□□ 0.29
Cacna1bO55017 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.87■□□□□ 0.29
Cacna1bO55017 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Cacna1bO55017 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1bO55017 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cacna1bO55017 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Cacna1bO55017 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1bO55017 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1bO55017 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1bO55017 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Cacna1bO55017 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.86■□□□□ 0.29
Cacna1bO55017 Gm27742-201ENSMUST00000184667 60 ntBASIC16.86■□□□□ 0.29
Cacna1bO55017 Il3ra-202ENSMUST00000223589 738 ntBASIC16.86■□□□□ 0.29
Cacna1bO55017 Gm10566-201ENSMUST00000086739 996 ntBASIC16.86■□□□□ 0.29
Cacna1bO55017 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1bO55017 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1bO55017 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1bO55017 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.86■□□□□ 0.29
Cacna1bO55017 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1bO55017 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1bO55017 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1bO55017 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1bO55017 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1bO55017 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1bO55017 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1bO55017 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cacna1bO55017 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
Cacna1bO55017 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1bO55017 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1bO55017 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.85■□□□□ 0.29
Cacna1bO55017 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1bO55017 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1bO55017 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1bO55017 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1bO55017 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cacna1bO55017 Gm10418-201ENSMUST00000100943 576 ntBASIC16.85■□□□□ 0.29
Cacna1bO55017 Gm26039-201ENSMUST00000158152 144 ntBASIC16.85■□□□□ 0.29
Cacna1bO55017 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.85■□□□□ 0.29
Cacna1bO55017 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.85■□□□□ 0.29
Cacna1bO55017 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Cacna1bO55017 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cacna1bO55017 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cacna1bO55017 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1bO55017 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1bO55017 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1bO55017 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cacna1bO55017 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1bO55017 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1bO55017 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.84■□□□□ 0.29
Cacna1bO55017 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1bO55017 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.84■□□□□ 0.29
Cacna1bO55017 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1bO55017 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1bO55017 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.84■□□□□ 0.29
Cacna1bO55017 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1bO55017 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1bO55017 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1bO55017 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.84■□□□□ 0.29
Cacna1bO55017 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cacna1bO55017 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.84■□□□□ 0.29
Cacna1bO55017 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.84■□□□□ 0.29
Cacna1bO55017 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cacna1bO55017 Gm45328-201ENSMUST00000210942 917 ntBASIC16.84■□□□□ 0.29
Cacna1bO55017 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Cacna1bO55017 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms