Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cldn5O54942 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.22■□□□□ 0.51
Cldn5O54942 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn5O54942 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn5O54942 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn5O54942 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cldn5O54942 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn5O54942 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn5O54942 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn5O54942 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn5O54942 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn5O54942 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn5O54942 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn5O54942 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.22■□□□□ 0.51
Cldn5O54942 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn5O54942 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cldn5O54942 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cldn5O54942 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.21■□□□□ 0.51
Cldn5O54942 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn5O54942 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn5O54942 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Cldn5O54942 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn5O54942 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.21■□□□□ 0.51
Cldn5O54942 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.21■□□□□ 0.51
Cldn5O54942 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn5O54942 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cldn5O54942 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn5O54942 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Cldn5O54942 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.21■□□□□ 0.51
Cldn5O54942 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn5O54942 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn5O54942 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cldn5O54942 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn5O54942 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn5O54942 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.2■□□□□ 0.5
Cldn5O54942 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn5O54942 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn5O54942 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn5O54942 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn5O54942 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn5O54942 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn5O54942 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cldn5O54942 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn5O54942 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn5O54942 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn5O54942 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.2■□□□□ 0.5
Cldn5O54942 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.2■□□□□ 0.5
Cldn5O54942 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn5O54942 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cldn5O54942 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn5O54942 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn5O54942 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn5O54942 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn5O54942 Gm7889-201ENSMUST00000185591 958 ntBASIC18.19■□□□□ 0.5
Cldn5O54942 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.19■□□□□ 0.5
Cldn5O54942 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cldn5O54942 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Cldn5O54942 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Cldn5O54942 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn5O54942 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn5O54942 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn5O54942 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Cldn5O54942 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn5O54942 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.19■□□□□ 0.5
Cldn5O54942 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn5O54942 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn5O54942 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn5O54942 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
Cldn5O54942 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn5O54942 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn5O54942 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn5O54942 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.18■□□□□ 0.5
Cldn5O54942 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Cldn5O54942 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Cldn5O54942 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Cldn5O54942 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn5O54942 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.18■□□□□ 0.5
Cldn5O54942 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.18■□□□□ 0.5
Cldn5O54942 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn5O54942 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn5O54942 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn5O54942 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn5O54942 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn5O54942 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn5O54942 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn5O54942 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn5O54942 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cldn5O54942 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn5O54942 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn5O54942 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn5O54942 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.17■□□□□ 0.5
Cldn5O54942 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn5O54942 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn5O54942 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn5O54942 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn5O54942 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn5O54942 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.17■□□□□ 0.5
Cldn5O54942 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn5O54942 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.16■□□□□ 0.5
Cldn5O54942 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms