Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Dkk1O54908 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dkk1O54908 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Dkk1O54908 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Dkk1O54908 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Dkk1O54908 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Dkk1O54908 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dkk1O54908 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dkk1O54908 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.32■□□□□ 0.04
Dkk1O54908 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dkk1O54908 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dkk1O54908 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dkk1O54908 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Dkk1O54908 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Dkk1O54908 Gm13744-201ENSMUST00000118953 850 ntBASIC15.31■□□□□ 0.04
Dkk1O54908 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.31■□□□□ 0.04
Dkk1O54908 Gm6681-201ENSMUST00000205215 607 ntBASIC15.31■□□□□ 0.04
Dkk1O54908 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Dkk1O54908 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Dkk1O54908 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dkk1O54908 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.31■□□□□ 0.04
Dkk1O54908 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.31■□□□□ 0.04
Dkk1O54908 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.31■□□□□ 0.04
Dkk1O54908 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.31■□□□□ 0.04
Dkk1O54908 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dkk1O54908 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dkk1O54908 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Dkk1O54908 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dkk1O54908 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.31■□□□□ 0.04
Dkk1O54908 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Dkk1O54908 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dkk1O54908 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dkk1O54908 Gm8902-201ENSMUST00000174341 1096 ntBASIC15.3■□□□□ 0.04
Dkk1O54908 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Dkk1O54908 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.3■□□□□ 0.04
Dkk1O54908 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Dkk1O54908 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Dkk1O54908 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Dkk1O54908 Gm45399-201ENSMUST00000209955 1016 ntBASIC15.3■□□□□ 0.04
Dkk1O54908 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.3■□□□□ 0.04
Dkk1O54908 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.3■□□□□ 0.04
Dkk1O54908 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dkk1O54908 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dkk1O54908 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dkk1O54908 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Dkk1O54908 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dkk1O54908 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dkk1O54908 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Dkk1O54908 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Dkk1O54908 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Dkk1O54908 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.29■□□□□ 0.04
Dkk1O54908 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dkk1O54908 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dkk1O54908 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Dkk1O54908 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dkk1O54908 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Dkk1O54908 Grk6-206ENSMUST00000224995 2971 ntBASIC15.29■□□□□ 0.04
Dkk1O54908 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dkk1O54908 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dkk1O54908 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.29■□□□□ 0.04
Dkk1O54908 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.29■□□□□ 0.04
Dkk1O54908 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Dkk1O54908 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.29■□□□□ 0.04
Dkk1O54908 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dkk1O54908 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dkk1O54908 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dkk1O54908 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Dkk1O54908 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dkk1O54908 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.29■□□□□ 0.04
Dkk1O54908 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Dkk1O54908 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dkk1O54908 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dkk1O54908 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dkk1O54908 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dkk1O54908 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.28■□□□□ 0.04
Dkk1O54908 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.28■□□□□ 0.04
Dkk1O54908 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dkk1O54908 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dkk1O54908 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Dkk1O54908 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.28■□□□□ 0.04
Dkk1O54908 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Dkk1O54908 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dkk1O54908 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.28■□□□□ 0.04
Dkk1O54908 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dkk1O54908 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.28■□□□□ 0.04
Dkk1O54908 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Dkk1O54908 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.28■□□□□ 0.04
Dkk1O54908 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dkk1O54908 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Dkk1O54908 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.28■□□□□ 0.04
Dkk1O54908 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Dkk1O54908 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dkk1O54908 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Dkk1O54908 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.28■□□□□ 0.04
Dkk1O54908 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Dkk1O54908 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dkk1O54908 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dkk1O54908 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Dkk1O54908 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Dkk1O54908 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms