Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sptlc1O35704 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sptlc1O35704 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sptlc1O35704 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sptlc1O35704 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sptlc1O35704 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sptlc1O35704 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sptlc1O35704 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Sptlc1O35704 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sptlc1O35704 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.16■□□□□ 0.66
Sptlc1O35704 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Sptlc1O35704 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sptlc1O35704 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sptlc1O35704 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sptlc1O35704 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Sptlc1O35704 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sptlc1O35704 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sptlc1O35704 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sptlc1O35704 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sptlc1O35704 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sptlc1O35704 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.15■□□□□ 0.66
Sptlc1O35704 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sptlc1O35704 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Sptlc1O35704 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sptlc1O35704 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Sptlc1O35704 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sptlc1O35704 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sptlc1O35704 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.15■□□□□ 0.66
Sptlc1O35704 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.15■□□□□ 0.66
Sptlc1O35704 Gm33142-201ENSMUST00000193913 867 ntBASIC19.15■□□□□ 0.66
Sptlc1O35704 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Sptlc1O35704 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sptlc1O35704 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sptlc1O35704 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sptlc1O35704 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sptlc1O35704 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sptlc1O35704 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Sptlc1O35704 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Sptlc1O35704 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sptlc1O35704 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Sptlc1O35704 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Sptlc1O35704 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sptlc1O35704 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
Sptlc1O35704 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sptlc1O35704 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sptlc1O35704 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sptlc1O35704 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Sptlc1O35704 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sptlc1O35704 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sptlc1O35704 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sptlc1O35704 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sptlc1O35704 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sptlc1O35704 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Sptlc1O35704 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sptlc1O35704 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.14■□□□□ 0.65
Sptlc1O35704 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sptlc1O35704 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sptlc1O35704 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Sptlc1O35704 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sptlc1O35704 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.13■□□□□ 0.65
Sptlc1O35704 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sptlc1O35704 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sptlc1O35704 Gm13474-201ENSMUST00000122466 815 ntBASIC19.13■□□□□ 0.65
Sptlc1O35704 Il3ra-202ENSMUST00000223589 738 ntBASIC19.13■□□□□ 0.65
Sptlc1O35704 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sptlc1O35704 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sptlc1O35704 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sptlc1O35704 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sptlc1O35704 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Sptlc1O35704 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sptlc1O35704 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sptlc1O35704 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sptlc1O35704 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sptlc1O35704 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sptlc1O35704 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sptlc1O35704 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sptlc1O35704 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sptlc1O35704 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.12■□□□□ 0.65
Sptlc1O35704 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sptlc1O35704 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sptlc1O35704 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sptlc1O35704 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Sptlc1O35704 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sptlc1O35704 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Sptlc1O35704 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.12■□□□□ 0.65
Sptlc1O35704 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.12■□□□□ 0.65
Sptlc1O35704 Gm9731-201ENSMUST00000209480 747 ntBASIC19.12■□□□□ 0.65
Sptlc1O35704 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sptlc1O35704 AC073947.1-201ENSMUST00000216991 649 ntBASIC19.12■□□□□ 0.65
Sptlc1O35704 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sptlc1O35704 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sptlc1O35704 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Sptlc1O35704 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sptlc1O35704 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Sptlc1O35704 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sptlc1O35704 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sptlc1O35704 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sptlc1O35704 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Sptlc1O35704 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sptlc1O35704 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms