Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
Slc1a6O35544 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc1a6O35544 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.31■□□□□ 0.36
Slc1a6O35544 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Slc1a6O35544 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc1a6O35544 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc1a6O35544 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc1a6O35544 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc1a6O35544 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.31■□□□□ 0.36
Slc1a6O35544 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc1a6O35544 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc1a6O35544 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc1a6O35544 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc1a6O35544 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc1a6O35544 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Slc1a6O35544 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc1a6O35544 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Slc1a6O35544 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Slc1a6O35544 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc1a6O35544 Gm42778-201ENSMUST00000199644 553 ntBASIC17.3■□□□□ 0.36
Slc1a6O35544 Gm29791-202ENSMUST00000207888 369 ntBASIC17.3■□□□□ 0.36
Slc1a6O35544 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.3■□□□□ 0.36
Slc1a6O35544 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc1a6O35544 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Slc1a6O35544 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc1a6O35544 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc1a6O35544 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.29■□□□□ 0.36
Slc1a6O35544 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.29■□□□□ 0.36
Slc1a6O35544 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc1a6O35544 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Slc1a6O35544 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc1a6O35544 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc1a6O35544 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc1a6O35544 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc1a6O35544 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc1a6O35544 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc1a6O35544 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc1a6O35544 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.29■□□□□ 0.36
Slc1a6O35544 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.29■□□□□ 0.36
Slc1a6O35544 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.29■□□□□ 0.36
Slc1a6O35544 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc1a6O35544 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc1a6O35544 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc1a6O35544 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc1a6O35544 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc1a6O35544 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc1a6O35544 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc1a6O35544 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc1a6O35544 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc1a6O35544 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc1a6O35544 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc1a6O35544 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc1a6O35544 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc1a6O35544 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc1a6O35544 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc1a6O35544 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc1a6O35544 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc1a6O35544 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc1a6O35544 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc1a6O35544 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Slc1a6O35544 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.27■□□□□ 0.36
Slc1a6O35544 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.27■□□□□ 0.36
Slc1a6O35544 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc1a6O35544 Gm10418-201ENSMUST00000100943 576 ntBASIC17.27■□□□□ 0.36
Slc1a6O35544 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Slc1a6O35544 Gm38285-201ENSMUST00000192928 922 ntBASIC17.27■□□□□ 0.36
Slc1a6O35544 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Slc1a6O35544 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc1a6O35544 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc1a6O35544 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc1a6O35544 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.27■□□□□ 0.35
Slc1a6O35544 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Slc1a6O35544 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.27■□□□□ 0.35
Slc1a6O35544 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Slc1a6O35544 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a6O35544 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a6O35544 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a6O35544 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a6O35544 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a6O35544 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.26■□□□□ 0.35
Slc1a6O35544 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a6O35544 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a6O35544 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a6O35544 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a6O35544 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a6O35544 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a6O35544 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.26■□□□□ 0.35
Slc1a6O35544 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a6O35544 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a6O35544 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a6O35544 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc1a6O35544 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a6O35544 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a6O35544 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a6O35544 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Slc1a6O35544 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a6O35544 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a6O35544 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Slc1a6O35544 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc1a6O35544 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms