Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 AC154855.1-201ENSMUST00000227353 1458 ntBASIC22.56■■□□□ 1.2
Col15a1O35206 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Col15a1O35206 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Col15a1O35206 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col15a1O35206 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col15a1O35206 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Col15a1O35206 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col15a1O35206 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC22.55■■□□□ 1.2
Col15a1O35206 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col15a1O35206 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Col15a1O35206 Gm6623-201ENSMUST00000173570 544 ntBASIC22.55■■□□□ 1.2
Col15a1O35206 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Col15a1O35206 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC22.55■■□□□ 1.2
Col15a1O35206 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC22.55■■□□□ 1.2
Col15a1O35206 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col15a1O35206 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col15a1O35206 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC22.55■■□□□ 1.2
Col15a1O35206 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
Col15a1O35206 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Col15a1O35206 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC22.55■■□□□ 1.2
Col15a1O35206 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col15a1O35206 Olfr129-201ENSMUST00000122318 993 ntBASIC22.54■■□□□ 1.2
Col15a1O35206 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC22.54■■□□□ 1.2
Col15a1O35206 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col15a1O35206 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col15a1O35206 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col15a1O35206 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Col15a1O35206 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col15a1O35206 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC22.54■■□□□ 1.2
Col15a1O35206 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC22.54■■□□□ 1.2
Col15a1O35206 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Col15a1O35206 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col15a1O35206 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col15a1O35206 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col15a1O35206 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC22.53■■□□□ 1.2
Col15a1O35206 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC22.53■■□□□ 1.2
Col15a1O35206 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Col15a1O35206 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col15a1O35206 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col15a1O35206 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col15a1O35206 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Col15a1O35206 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Col15a1O35206 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Col15a1O35206 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Col15a1O35206 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col15a1O35206 Gm35558-201ENSMUST00000222675 2219 ntBASIC22.53■■□□□ 1.2
Col15a1O35206 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col15a1O35206 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col15a1O35206 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col15a1O35206 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col15a1O35206 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col15a1O35206 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Col15a1O35206 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.2
Col15a1O35206 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Col15a1O35206 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col15a1O35206 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col15a1O35206 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col15a1O35206 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Col15a1O35206 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col15a1O35206 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col15a1O35206 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Col15a1O35206 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col15a1O35206 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Col15a1O35206 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Col15a1O35206 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Col15a1O35206 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col15a1O35206 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col15a1O35206 Gm43272-201ENSMUST00000200599 1584 ntBASIC22.51■■□□□ 1.19
Col15a1O35206 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Col15a1O35206 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col15a1O35206 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col15a1O35206 Gm6627-201ENSMUST00000218299 2386 ntBASIC22.51■■□□□ 1.19
Col15a1O35206 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Col15a1O35206 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC22.5■■□□□ 1.19
Col15a1O35206 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col15a1O35206 Gm18115-201ENSMUST00000221209 621 ntBASIC22.5■■□□□ 1.19
Col15a1O35206 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col15a1O35206 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col15a1O35206 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col15a1O35206 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Col15a1O35206 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col15a1O35206 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col15a1O35206 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Col15a1O35206 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Col15a1O35206 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col15a1O35206 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col15a1O35206 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col15a1O35206 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col15a1O35206 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col15a1O35206 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col15a1O35206 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col15a1O35206 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col15a1O35206 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Col15a1O35206 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col15a1O35206 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC22.49■■□□□ 1.19
Col15a1O35206 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC22.49■■□□□ 1.19
Col15a1O35206 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col15a1O35206 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col15a1O35206 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Col15a1O35206 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms