Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Alx4O35137 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Alx4O35137 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Alx4O35137 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Alx4O35137 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Alx4O35137 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Alx4O35137 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Alx4O35137 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Alx4O35137 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Alx4O35137 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Alx4O35137 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.65■□□□□ 0.1
Alx4O35137 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Alx4O35137 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Alx4O35137 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Alx4O35137 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Alx4O35137 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Alx4O35137 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.65■□□□□ 0.1
Alx4O35137 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Alx4O35137 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Alx4O35137 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Alx4O35137 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Alx4O35137 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.65■□□□□ 0.1
Alx4O35137 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Alx4O35137 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Alx4O35137 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Alx4O35137 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Alx4O35137 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Alx4O35137 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Alx4O35137 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Alx4O35137 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Alx4O35137 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Alx4O35137 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Alx4O35137 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Alx4O35137 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.64■□□□□ 0.09
Alx4O35137 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Alx4O35137 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Alx4O35137 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Alx4O35137 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Alx4O35137 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Alx4O35137 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.64■□□□□ 0.09
Alx4O35137 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Alx4O35137 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Alx4O35137 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Alx4O35137 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Alx4O35137 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Alx4O35137 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Alx4O35137 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.63■□□□□ 0.09
Alx4O35137 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Alx4O35137 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.63■□□□□ 0.09
Alx4O35137 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.63■□□□□ 0.09
Alx4O35137 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Alx4O35137 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Alx4O35137 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Alx4O35137 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Alx4O35137 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Alx4O35137 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Alx4O35137 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Alx4O35137 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx4O35137 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Alx4O35137 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx4O35137 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx4O35137 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.62■□□□□ 0.09
Alx4O35137 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Alx4O35137 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.62■□□□□ 0.09
Alx4O35137 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.62■□□□□ 0.09
Alx4O35137 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.62■□□□□ 0.09
Alx4O35137 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx4O35137 Zfp783-201ENSMUST00000095946 670 ntBASIC15.62■□□□□ 0.09
Alx4O35137 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx4O35137 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Alx4O35137 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx4O35137 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx4O35137 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Alx4O35137 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Alx4O35137 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Alx4O35137 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Alx4O35137 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alx4O35137 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Alx4O35137 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Alx4O35137 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.61■□□□□ 0.09
Alx4O35137 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alx4O35137 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Alx4O35137 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alx4O35137 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Alx4O35137 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Alx4O35137 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Alx4O35137 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Alx4O35137 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alx4O35137 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alx4O35137 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alx4O35137 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Alx4O35137 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alx4O35137 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Alx4O35137 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.6■□□□□ 0.09
Alx4O35137 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alx4O35137 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.6■□□□□ 0.09
Alx4O35137 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Alx4O35137 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alx4O35137 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Alx4O35137 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms