Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh2b3O09039 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh2b3O09039 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh2b3O09039 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Sh2b3O09039 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh2b3O09039 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.6■□□□□ 0.09
Sh2b3O09039 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh2b3O09039 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh2b3O09039 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh2b3O09039 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Sh2b3O09039 Gm11643-201ENSMUST00000119578 864 ntBASIC15.6■□□□□ 0.09
Sh2b3O09039 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.6■□□□□ 0.09
Sh2b3O09039 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
Sh2b3O09039 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.6■□□□□ 0.09
Sh2b3O09039 Gm5417-201ENSMUST00000079706 384 ntBASIC15.6■□□□□ 0.09
Sh2b3O09039 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh2b3O09039 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Sh2b3O09039 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh2b3O09039 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Sh2b3O09039 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh2b3O09039 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh2b3O09039 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Sh2b3O09039 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh2b3O09039 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh2b3O09039 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Sh2b3O09039 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.59■□□□□ 0.09
Sh2b3O09039 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh2b3O09039 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh2b3O09039 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.59■□□□□ 0.09
Sh2b3O09039 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh2b3O09039 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Sh2b3O09039 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.59■□□□□ 0.09
Sh2b3O09039 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh2b3O09039 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh2b3O09039 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh2b3O09039 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh2b3O09039 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh2b3O09039 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh2b3O09039 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh2b3O09039 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh2b3O09039 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.59■□□□□ 0.09
Sh2b3O09039 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.58■□□□□ 0.09
Sh2b3O09039 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Sh2b3O09039 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sh2b3O09039 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sh2b3O09039 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2b3O09039 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2b3O09039 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Sh2b3O09039 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2b3O09039 Gm43183-201ENSMUST00000200632 547 ntBASIC15.58■□□□□ 0.08
Sh2b3O09039 Gm9987-201ENSMUST00000069768 567 ntBASIC15.58■□□□□ 0.08
Sh2b3O09039 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2b3O09039 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.58■□□□□ 0.08
Sh2b3O09039 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2b3O09039 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2b3O09039 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2b3O09039 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2b3O09039 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2b3O09039 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2b3O09039 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2b3O09039 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2b3O09039 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Sh2b3O09039 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2b3O09039 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2b3O09039 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2b3O09039 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh2b3O09039 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Sh2b3O09039 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2b3O09039 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2b3O09039 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2b3O09039 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2b3O09039 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.57■□□□□ 0.08
Sh2b3O09039 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2b3O09039 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2b3O09039 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2b3O09039 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.57■□□□□ 0.08
Sh2b3O09039 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.57■□□□□ 0.08
Sh2b3O09039 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2b3O09039 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2b3O09039 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Sh2b3O09039 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Sh2b3O09039 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2b3O09039 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2b3O09039 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh2b3O09039 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2b3O09039 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2b3O09039 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.56■□□□□ 0.08
Sh2b3O09039 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2b3O09039 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.56■□□□□ 0.08
Sh2b3O09039 Gm15375-201ENSMUST00000119510 849 ntBASIC15.56■□□□□ 0.08
Sh2b3O09039 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.56■□□□□ 0.08
Sh2b3O09039 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2b3O09039 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.56■□□□□ 0.08
Sh2b3O09039 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.56■□□□□ 0.08
Sh2b3O09039 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2b3O09039 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2b3O09039 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2b3O09039 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2b3O09039 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh2b3O09039 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms