Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim34bJ3QNR8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim34bJ3QNR8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Trim34bJ3QNR8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim34bJ3QNR8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Trim34bJ3QNR8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim34bJ3QNR8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim34bJ3QNR8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.47■■□□□ 1.03
Trim34bJ3QNR8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Trim34bJ3QNR8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim34bJ3QNR8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim34bJ3QNR8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim34bJ3QNR8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim34bJ3QNR8 AA414768-201ENSMUST00000121924 1257 ntBASIC21.46■■□□□ 1.03
Trim34bJ3QNR8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim34bJ3QNR8 Gm6728-201ENSMUST00000178117 1065 ntBASIC21.46■■□□□ 1.03
Trim34bJ3QNR8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim34bJ3QNR8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim34bJ3QNR8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Trim34bJ3QNR8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Trim34bJ3QNR8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim34bJ3QNR8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Trim34bJ3QNR8 Il3ra-202ENSMUST00000223589 738 ntBASIC21.45■■□□□ 1.02
Trim34bJ3QNR8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim34bJ3QNR8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
Trim34bJ3QNR8 Idnk-204ENSMUST00000226010 1898 ntBASIC21.45■■□□□ 1.02
Trim34bJ3QNR8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim34bJ3QNR8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim34bJ3QNR8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim34bJ3QNR8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim34bJ3QNR8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trim34bJ3QNR8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trim34bJ3QNR8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim34bJ3QNR8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC21.44■■□□□ 1.02
Trim34bJ3QNR8 Gm21362-201ENSMUST00000194272 928 ntBASIC21.44■■□□□ 1.02
Trim34bJ3QNR8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trim34bJ3QNR8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim34bJ3QNR8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim34bJ3QNR8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim34bJ3QNR8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim34bJ3QNR8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim34bJ3QNR8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim34bJ3QNR8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim34bJ3QNR8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim34bJ3QNR8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC21.43■■□□□ 1.02
Trim34bJ3QNR8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim34bJ3QNR8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim34bJ3QNR8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim34bJ3QNR8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim34bJ3QNR8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim34bJ3QNR8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Trim34bJ3QNR8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim34bJ3QNR8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Trim34bJ3QNR8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim34bJ3QNR8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim34bJ3QNR8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim34bJ3QNR8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC21.42■■□□□ 1.02
Trim34bJ3QNR8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim34bJ3QNR8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trim34bJ3QNR8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trim34bJ3QNR8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.42■■□□□ 1.02
Trim34bJ3QNR8 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.42■■□□□ 1.02
Trim34bJ3QNR8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Trim34bJ3QNR8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim34bJ3QNR8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim34bJ3QNR8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim34bJ3QNR8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
Trim34bJ3QNR8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim34bJ3QNR8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim34bJ3QNR8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim34bJ3QNR8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Trim34bJ3QNR8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.41■■□□□ 1.02
Trim34bJ3QNR8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim34bJ3QNR8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim34bJ3QNR8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim34bJ3QNR8 Gm7370-201ENSMUST00000219471 767 ntBASIC21.41■■□□□ 1.02
Trim34bJ3QNR8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim34bJ3QNR8 Gm7367-201ENSMUST00000057611 492 ntBASIC21.41■■□□□ 1.02
Trim34bJ3QNR8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim34bJ3QNR8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim34bJ3QNR8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Trim34bJ3QNR8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC21.41■■□□□ 1.02
Trim34bJ3QNR8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim34bJ3QNR8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim34bJ3QNR8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim34bJ3QNR8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim34bJ3QNR8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim34bJ3QNR8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim34bJ3QNR8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim34bJ3QNR8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Trim34bJ3QNR8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim34bJ3QNR8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim34bJ3QNR8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim34bJ3QNR8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Trim34bJ3QNR8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.4■■□□□ 1.02
Trim34bJ3QNR8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim34bJ3QNR8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim34bJ3QNR8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim34bJ3QNR8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC21.4■■□□□ 1.02
Trim34bJ3QNR8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms