Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.51■□□□□ 0.39
Gm3139J3QK78 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3139J3QK78 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3139J3QK78 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3139J3QK78 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3139J3QK78 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3139J3QK78 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Gm3139J3QK78 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.5■□□□□ 0.39
Gm3139J3QK78 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3139J3QK78 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3139J3QK78 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3139J3QK78 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3139J3QK78 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.5■□□□□ 0.39
Gm3139J3QK78 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3139J3QK78 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Gm3139J3QK78 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.5■□□□□ 0.39
Gm3139J3QK78 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3139J3QK78 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3139J3QK78 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3139J3QK78 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3139J3QK78 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3139J3QK78 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3139J3QK78 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3139J3QK78 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.49■□□□□ 0.39
Gm3139J3QK78 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3139J3QK78 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3139J3QK78 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3139J3QK78 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3139J3QK78 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3139J3QK78 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3139J3QK78 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3139J3QK78 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3139J3QK78 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.49■□□□□ 0.39
Gm3139J3QK78 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.49■□□□□ 0.39
Gm3139J3QK78 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.49■□□□□ 0.39
Gm3139J3QK78 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3139J3QK78 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3139J3QK78 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Gm3139J3QK78 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3139J3QK78 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3139J3QK78 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Gm3139J3QK78 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3139J3QK78 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Gm3139J3QK78 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3139J3QK78 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.48■□□□□ 0.39
Gm3139J3QK78 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3139J3QK78 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3139J3QK78 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3139J3QK78 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Gm3139J3QK78 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3139J3QK78 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Gm3139J3QK78 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3139J3QK78 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3139J3QK78 Mir8112-201ENSMUST00000184382 131 ntBASIC17.48■□□□□ 0.39
Gm3139J3QK78 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3139J3QK78 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3139J3QK78 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3139J3QK78 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3139J3QK78 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3139J3QK78 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3139J3QK78 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3139J3QK78 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3139J3QK78 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3139J3QK78 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.47■□□□□ 0.39
Gm3139J3QK78 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Gm3139J3QK78 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.47■□□□□ 0.39
Gm3139J3QK78 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3139J3QK78 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3139J3QK78 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.47■□□□□ 0.39
Gm3139J3QK78 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3139J3QK78 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3139J3QK78 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3139J3QK78 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3139J3QK78 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Gm3139J3QK78 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.46■□□□□ 0.39
Gm3139J3QK78 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3139J3QK78 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3139J3QK78 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Gm3139J3QK78 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Gm3139J3QK78 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3139J3QK78 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Gm3139J3QK78 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.46■□□□□ 0.39
Gm3139J3QK78 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3139J3QK78 Gm27463-201ENSMUST00000183569 57 ntBASIC17.46■□□□□ 0.39
Gm3139J3QK78 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.46■□□□□ 0.39
Gm3139J3QK78 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3139J3QK78 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3139J3QK78 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3139J3QK78 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Gm3139J3QK78 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Gm3139J3QK78 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Gm3139J3QK78 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3139J3QK78 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3139J3QK78 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3139J3QK78 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3139J3QK78 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3139J3QK78 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Gm3139J3QK78 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Gm3139J3QK78 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.45■□□□□ 0.38
Gm3139J3QK78 Gm43799-201ENSMUST00000201845 579 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms