Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Gm11127A7VMS2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Gm11127A7VMS2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm11127A7VMS2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm11127A7VMS2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm11127A7VMS2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm11127A7VMS2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Gm11127A7VMS2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm11127A7VMS2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.54■□□□□ 0.08
Gm11127A7VMS2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm11127A7VMS2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm11127A7VMS2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Gm11127A7VMS2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm11127A7VMS2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gm11127A7VMS2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.53■□□□□ 0.08
Gm11127A7VMS2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm11127A7VMS2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Gm11127A7VMS2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm11127A7VMS2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gm11127A7VMS2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm11127A7VMS2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm11127A7VMS2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gm11127A7VMS2 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.53■□□□□ 0.08
Gm11127A7VMS2 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.53■□□□□ 0.08
Gm11127A7VMS2 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.53■□□□□ 0.08
Gm11127A7VMS2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm11127A7VMS2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm11127A7VMS2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm11127A7VMS2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm11127A7VMS2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Gm11127A7VMS2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.52■□□□□ 0.08
Gm11127A7VMS2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Gm11127A7VMS2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm11127A7VMS2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.52■□□□□ 0.08
Gm11127A7VMS2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm11127A7VMS2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm11127A7VMS2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm11127A7VMS2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm11127A7VMS2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gm11127A7VMS2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gm11127A7VMS2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.52■□□□□ 0.08
Gm11127A7VMS2 Gm13534-201ENSMUST00000121169 513 ntBASIC15.52■□□□□ 0.08
Gm11127A7VMS2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gm11127A7VMS2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.52■□□□□ 0.08
Gm11127A7VMS2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.52■□□□□ 0.08
Gm11127A7VMS2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm11127A7VMS2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gm11127A7VMS2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.52■□□□□ 0.08
Gm11127A7VMS2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.52■□□□□ 0.08
Gm11127A7VMS2 Gm10493-201ENSMUST00000097270 612 ntBASIC15.52■□□□□ 0.08
Gm11127A7VMS2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.52■□□□□ 0.08
Gm11127A7VMS2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.52■□□□□ 0.07
Gm11127A7VMS2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gm11127A7VMS2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Gm11127A7VMS2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gm11127A7VMS2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gm11127A7VMS2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gm11127A7VMS2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gm11127A7VMS2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.51■□□□□ 0.07
Gm11127A7VMS2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Gm11127A7VMS2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm11127A7VMS2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm11127A7VMS2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm11127A7VMS2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.5■□□□□ 0.07
Gm11127A7VMS2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm11127A7VMS2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.5■□□□□ 0.07
Gm11127A7VMS2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Gm11127A7VMS2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Gm11127A7VMS2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Gm11127A7VMS2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm11127A7VMS2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.5■□□□□ 0.07
Gm11127A7VMS2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm11127A7VMS2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.5■□□□□ 0.07
Gm11127A7VMS2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.5■□□□□ 0.07
Gm11127A7VMS2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm11127A7VMS2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm11127A7VMS2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm11127A7VMS2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm11127A7VMS2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm11127A7VMS2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms