Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm28729A0A1B0GSW2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28729A0A1B0GSW2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28729A0A1B0GSW2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.14■□□□□ 0.33
Gm28729A0A1B0GSW2 Ank2-226ENSMUST00000189368 339 ntBASIC17.14■□□□□ 0.33
Gm28729A0A1B0GSW2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28729A0A1B0GSW2 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.14■□□□□ 0.33
Gm28729A0A1B0GSW2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28729A0A1B0GSW2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28729A0A1B0GSW2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28729A0A1B0GSW2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28729A0A1B0GSW2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28729A0A1B0GSW2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28729A0A1B0GSW2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28729A0A1B0GSW2 Grk6-206ENSMUST00000224995 2971 ntBASIC17.13■□□□□ 0.33
Gm28729A0A1B0GSW2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28729A0A1B0GSW2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28729A0A1B0GSW2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28729A0A1B0GSW2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.13■□□□□ 0.33
Gm28729A0A1B0GSW2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28729A0A1B0GSW2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28729A0A1B0GSW2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28729A0A1B0GSW2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28729A0A1B0GSW2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gm28729A0A1B0GSW2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28729A0A1B0GSW2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gm28729A0A1B0GSW2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Gm7213-201ENSMUST00000215977 950 ntBASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Gm28729A0A1B0GSW2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Gm7284-201ENSMUST00000131667 944 ntBASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Gm17661-201ENSMUST00000170317 270 ntBASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Mir1668-201ENSMUST00000184114 107 ntBASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Gm10566-201ENSMUST00000086739 996 ntBASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28729A0A1B0GSW2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28729A0A1B0GSW2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28729A0A1B0GSW2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
Gm28729A0A1B0GSW2 Gm25016-201ENSMUST00000158399 131 ntBASIC17.1■□□□□ 0.33
Gm28729A0A1B0GSW2 Gm27389-201ENSMUST00000183622 195 ntBASIC17.1■□□□□ 0.33
Gm28729A0A1B0GSW2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm28729A0A1B0GSW2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28729A0A1B0GSW2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28729A0A1B0GSW2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Gm14859-201ENSMUST00000117752 357 ntBASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28729A0A1B0GSW2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms