Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3854A0A1B0GSS6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.56■□□□□ 0.4
Gm3854A0A1B0GSS6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3854A0A1B0GSS6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3854A0A1B0GSS6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3854A0A1B0GSS6 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.56■□□□□ 0.4
Gm3854A0A1B0GSS6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3854A0A1B0GSS6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.56■□□□□ 0.4
Gm3854A0A1B0GSS6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gm3854A0A1B0GSS6 Gm17661-201ENSMUST00000170317 270 ntBASIC17.56■□□□□ 0.4
Gm3854A0A1B0GSS6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Gm3854A0A1B0GSS6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3854A0A1B0GSS6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3854A0A1B0GSS6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3854A0A1B0GSS6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3854A0A1B0GSS6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3854A0A1B0GSS6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3854A0A1B0GSS6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3854A0A1B0GSS6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm3854A0A1B0GSS6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm3854A0A1B0GSS6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3854A0A1B0GSS6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3854A0A1B0GSS6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3854A0A1B0GSS6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3854A0A1B0GSS6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Gm3854A0A1B0GSS6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3854A0A1B0GSS6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3854A0A1B0GSS6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3854A0A1B0GSS6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3854A0A1B0GSS6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3854A0A1B0GSS6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3854A0A1B0GSS6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3854A0A1B0GSS6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.54■□□□□ 0.4
Gm3854A0A1B0GSS6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3854A0A1B0GSS6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3854A0A1B0GSS6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.54■□□□□ 0.4
Gm3854A0A1B0GSS6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm3854A0A1B0GSS6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3854A0A1B0GSS6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3854A0A1B0GSS6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3854A0A1B0GSS6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3854A0A1B0GSS6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3854A0A1B0GSS6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Gm3854A0A1B0GSS6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3854A0A1B0GSS6 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3854A0A1B0GSS6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Gm3854A0A1B0GSS6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3854A0A1B0GSS6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.53■□□□□ 0.4
Gm3854A0A1B0GSS6 Gm37025-201ENSMUST00000195159 829 ntBASIC17.53■□□□□ 0.4
Gm3854A0A1B0GSS6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3854A0A1B0GSS6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Gm3854A0A1B0GSS6 Gm9731-201ENSMUST00000209480 747 ntBASIC17.53■□□□□ 0.4
Gm3854A0A1B0GSS6 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.53■□□□□ 0.4
Gm3854A0A1B0GSS6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3854A0A1B0GSS6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3854A0A1B0GSS6 Golph3-205ENSMUST00000228671 2842 ntBASIC17.53■□□□□ 0.4
Gm3854A0A1B0GSS6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3854A0A1B0GSS6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3854A0A1B0GSS6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3854A0A1B0GSS6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3854A0A1B0GSS6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3854A0A1B0GSS6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3854A0A1B0GSS6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Gm3854A0A1B0GSS6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3854A0A1B0GSS6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3854A0A1B0GSS6 Mir1668-201ENSMUST00000184114 107 ntBASIC17.52■□□□□ 0.4
Gm3854A0A1B0GSS6 Gm7213-201ENSMUST00000215977 950 ntBASIC17.52■□□□□ 0.4
Gm3854A0A1B0GSS6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3854A0A1B0GSS6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Gm3854A0A1B0GSS6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Gm3854A0A1B0GSS6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3854A0A1B0GSS6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm3854A0A1B0GSS6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm3854A0A1B0GSS6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm3854A0A1B0GSS6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm3854A0A1B0GSS6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.52■□□□□ 0.39
Gm3854A0A1B0GSS6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3854A0A1B0GSS6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3854A0A1B0GSS6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3854A0A1B0GSS6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3854A0A1B0GSS6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3854A0A1B0GSS6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.51■□□□□ 0.39
Gm3854A0A1B0GSS6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
Gm3854A0A1B0GSS6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3854A0A1B0GSS6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Gm3854A0A1B0GSS6 Gm5587-201ENSMUST00000206270 674 ntBASIC17.51■□□□□ 0.39
Gm3854A0A1B0GSS6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3854A0A1B0GSS6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3854A0A1B0GSS6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3854A0A1B0GSS6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms